Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptchd3Q0EEE2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptchd3Q0EEE2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.05■□□□□ 0.48
Ptchd3Q0EEE2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ptchd3Q0EEE2 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.05■□□□□ 0.48
Ptchd3Q0EEE2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptchd3Q0EEE2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ptchd3Q0EEE2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.05■□□□□ 0.48
Ptchd3Q0EEE2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.05■□□□□ 0.48
Ptchd3Q0EEE2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.05■□□□□ 0.48
Ptchd3Q0EEE2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptchd3Q0EEE2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptchd3Q0EEE2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptchd3Q0EEE2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ptchd3Q0EEE2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ptchd3Q0EEE2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ptchd3Q0EEE2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ptchd3Q0EEE2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ptchd3Q0EEE2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ptchd3Q0EEE2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ptchd3Q0EEE2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ptchd3Q0EEE2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ptchd3Q0EEE2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ptchd3Q0EEE2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ptchd3Q0EEE2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ptchd3Q0EEE2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
Ptchd3Q0EEE2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ptchd3Q0EEE2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ptchd3Q0EEE2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Ptchd3Q0EEE2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ptchd3Q0EEE2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ptchd3Q0EEE2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Ptchd3Q0EEE2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ptchd3Q0EEE2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ptchd3Q0EEE2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Ptchd3Q0EEE2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptchd3Q0EEE2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptchd3Q0EEE2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptchd3Q0EEE2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ptchd3Q0EEE2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptchd3Q0EEE2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptchd3Q0EEE2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptchd3Q0EEE2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ptchd3Q0EEE2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.01■□□□□ 0.47
Ptchd3Q0EEE2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptchd3Q0EEE2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptchd3Q0EEE2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptchd3Q0EEE2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptchd3Q0EEE2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ptchd3Q0EEE2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ptchd3Q0EEE2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ptchd3Q0EEE2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ptchd3Q0EEE2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ptchd3Q0EEE2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ptchd3Q0EEE2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18■□□□□ 0.47
Ptchd3Q0EEE2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ptchd3Q0EEE2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms