Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nkx2-3P97334 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nkx2-3P97334 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Nkx2-3P97334 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nkx2-3P97334 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
Nkx2-3P97334 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Nkx2-3P97334 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nkx2-3P97334 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nkx2-3P97334 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nkx2-3P97334 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nkx2-3P97334 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Nkx2-3P97334 AC126028.2-201ENSMUST00000228100 1833 ntBASIC23.84■■□□□ 1.41
Nkx2-3P97334 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nkx2-3P97334 Nrn1-203ENSMUST00000223611 1443 ntBASIC23.84■■□□□ 1.41
Nkx2-3P97334 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Nkx2-3P97334 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Nkx2-3P97334 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Nkx2-3P97334 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Nkx2-3P97334 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Nkx2-3P97334 Gm715-201ENSMUST00000117865 831 ntBASIC23.83■■□□□ 1.41
Nkx2-3P97334 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Nkx2-3P97334 Gm9484-201ENSMUST00000195892 1159 ntBASIC23.83■■□□□ 1.41
Nkx2-3P97334 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Nkx2-3P97334 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Nkx2-3P97334 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Nkx2-3P97334 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Nkx2-3P97334 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nkx2-3P97334 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC23.82■■□□□ 1.4
Nkx2-3P97334 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nkx2-3P97334 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC23.82■■□□□ 1.4
Nkx2-3P97334 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nkx2-3P97334 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
Nkx2-3P97334 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Nkx2-3P97334 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC23.81■■□□□ 1.4
Nkx2-3P97334 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nkx2-3P97334 Gm15847-201ENSMUST00000121417 1065 ntBASIC23.81■■□□□ 1.4
Nkx2-3P97334 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC23.81■■□□□ 1.4
Nkx2-3P97334 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC23.8■■□□□ 1.4
Nkx2-3P97334 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nkx2-3P97334 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nkx2-3P97334 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Nkx2-3P97334 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nkx2-3P97334 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Nkx2-3P97334 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nkx2-3P97334 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nkx2-3P97334 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC23.8■■□□□ 1.4
Nkx2-3P97334 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Nkx2-3P97334 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nkx2-3P97334 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Nkx2-3P97334 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.79■■□□□ 1.4
Nkx2-3P97334 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC23.79■■□□□ 1.4
Nkx2-3P97334 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nkx2-3P97334 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Nkx2-3P97334 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nkx2-3P97334 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Nkx2-3P97334 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nkx2-3P97334 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nkx2-3P97334 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nkx2-3P97334 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Nkx2-3P97334 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nkx2-3P97334 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Nkx2-3P97334 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC23.78■■□□□ 1.4
Nkx2-3P97334 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Nkx2-3P97334 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Nkx2-3P97334 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC23.78■■□□□ 1.4
Nkx2-3P97334 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Nkx2-3P97334 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nkx2-3P97334 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nkx2-3P97334 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nkx2-3P97334 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nkx2-3P97334 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nkx2-3P97334 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nkx2-3P97334 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nkx2-3P97334 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nkx2-3P97334 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
Nkx2-3P97334 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC23.77■■□□□ 1.4
Nkx2-3P97334 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nkx2-3P97334 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC23.77■■□□□ 1.4
Nkx2-3P97334 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC23.77■■□□□ 1.4
Nkx2-3P97334 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC23.77■■□□□ 1.4
Nkx2-3P97334 AC135963.1-201ENSMUST00000211640 717 ntBASIC23.77■■□□□ 1.4
Nkx2-3P97334 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nkx2-3P97334 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Nkx2-3P97334 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nkx2-3P97334 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Nkx2-3P97334 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nkx2-3P97334 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
Nkx2-3P97334 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nkx2-3P97334 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nkx2-3P97334 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nkx2-3P97334 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nkx2-3P97334 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nkx2-3P97334 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC23.76■■□□□ 1.39
Nkx2-3P97334 Gm11927-201ENSMUST00000118472 759 ntBASIC23.76■■□□□ 1.39
Nkx2-3P97334 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC23.76■■□□□ 1.39
Nkx2-3P97334 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nkx2-3P97334 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
Nkx2-3P97334 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nkx2-3P97334 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nkx2-3P97334 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms