Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43bP86448 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43bP86448 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43bP86448 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43bP86448 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43bP86448 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trim43bP86448 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43bP86448 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43bP86448 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim43bP86448 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.23■□□□□ 0.67
Trim43bP86448 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43bP86448 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim43bP86448 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.23■□□□□ 0.67
Trim43bP86448 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trim43bP86448 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43bP86448 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.23■□□□□ 0.67
Trim43bP86448 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43bP86448 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.23■□□□□ 0.67
Trim43bP86448 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43bP86448 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim43bP86448 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43bP86448 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43bP86448 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim43bP86448 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim43bP86448 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim43bP86448 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43bP86448 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trim43bP86448 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim43bP86448 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43bP86448 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43bP86448 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43bP86448 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43bP86448 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43bP86448 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43bP86448 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43bP86448 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.21■□□□□ 0.67
Trim43bP86448 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.21■□□□□ 0.67
Trim43bP86448 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.21■□□□□ 0.67
Trim43bP86448 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43bP86448 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43bP86448 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43bP86448 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43bP86448 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43bP86448 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43bP86448 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43bP86448 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43bP86448 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Trim43bP86448 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43bP86448 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43bP86448 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trim43bP86448 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43bP86448 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43bP86448 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43bP86448 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43bP86448 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.2■□□□□ 0.66
Trim43bP86448 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43bP86448 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43bP86448 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43bP86448 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trim43bP86448 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43bP86448 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43bP86448 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43bP86448 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43bP86448 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43bP86448 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43bP86448 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43bP86448 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43bP86448 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43bP86448 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43bP86448 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim43bP86448 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43bP86448 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trim43bP86448 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trim43bP86448 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43bP86448 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Trim43bP86448 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim43bP86448 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43bP86448 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43bP86448 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Trim43bP86448 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43bP86448 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim43bP86448 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43bP86448 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.19■□□□□ 0.66
Trim43bP86448 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43bP86448 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.18■□□□□ 0.66
Trim43bP86448 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43bP86448 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43bP86448 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43bP86448 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43bP86448 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.18■□□□□ 0.66
Trim43bP86448 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43bP86448 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43bP86448 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim43bP86448 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43bP86448 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43bP86448 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43bP86448 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43bP86448 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43bP86448 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim43bP86448 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms