Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb1P70662 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.67■□□□□ 0.58
Ldb1P70662 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb1P70662 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb1P70662 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb1P70662 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Ldb1P70662 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Ldb1P70662 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ldb1P70662 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ldb1P70662 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ldb1P70662 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.66■□□□□ 0.58
Ldb1P70662 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.66■□□□□ 0.58
Ldb1P70662 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ldb1P70662 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ldb1P70662 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ldb1P70662 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ldb1P70662 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ldb1P70662 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb1P70662 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb1P70662 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb1P70662 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb1P70662 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.65■□□□□ 0.58
Ldb1P70662 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.65■□□□□ 0.58
Ldb1P70662 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb1P70662 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb1P70662 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ldb1P70662 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb1P70662 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.65■□□□□ 0.58
Ldb1P70662 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb1P70662 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb1P70662 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.65■□□□□ 0.58
Ldb1P70662 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb1P70662 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb1P70662 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb1P70662 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ldb1P70662 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.65■□□□□ 0.58
Ldb1P70662 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ldb1P70662 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ldb1P70662 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ldb1P70662 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ldb1P70662 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.64■□□□□ 0.57
Ldb1P70662 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ldb1P70662 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ldb1P70662 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ldb1P70662 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ldb1P70662 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ldb1P70662 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.64■□□□□ 0.57
Ldb1P70662 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ldb1P70662 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb1P70662 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ldb1P70662 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb1P70662 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb1P70662 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb1P70662 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb1P70662 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.63■□□□□ 0.57
Ldb1P70662 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb1P70662 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.63■□□□□ 0.57
Ldb1P70662 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb1P70662 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb1P70662 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb1P70662 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb1P70662 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb1P70662 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb1P70662 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb1P70662 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ldb1P70662 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb1P70662 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb1P70662 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb1P70662 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ldb1P70662 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.62■□□□□ 0.57
Ldb1P70662 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.62■□□□□ 0.57
Ldb1P70662 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb1P70662 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb1P70662 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb1P70662 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb1P70662 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.62■□□□□ 0.57
Ldb1P70662 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb1P70662 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb1P70662 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb1P70662 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb1P70662 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb1P70662 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb1P70662 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb1P70662 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb1P70662 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb1P70662 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb1P70662 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb1P70662 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb1P70662 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.61■□□□□ 0.57
Ldb1P70662 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb1P70662 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.61■□□□□ 0.57
Ldb1P70662 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.61■□□□□ 0.57
Ldb1P70662 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb1P70662 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb1P70662 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ldb1P70662 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ldb1P70662 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ldb1P70662 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ldb1P70662 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.6■□□□□ 0.57
Ldb1P70662 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms