Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gcm1P70348 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gcm1P70348 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.68■□□□□ 0.1
Gcm1P70348 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.68■□□□□ 0.1
Gcm1P70348 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.68■□□□□ 0.1
Gcm1P70348 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.68■□□□□ 0.1
Gcm1P70348 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gcm1P70348 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.68■□□□□ 0.1
Gcm1P70348 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gcm1P70348 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Gcm1P70348 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.68■□□□□ 0.1
Gcm1P70348 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.68■□□□□ 0.1
Gcm1P70348 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gcm1P70348 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gcm1P70348 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gcm1P70348 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gcm1P70348 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gcm1P70348 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gcm1P70348 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.67■□□□□ 0.1
Gcm1P70348 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.67■□□□□ 0.1
Gcm1P70348 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gcm1P70348 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.67■□□□□ 0.1
Gcm1P70348 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gcm1P70348 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gcm1P70348 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gcm1P70348 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gcm1P70348 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gcm1P70348 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gcm1P70348 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gcm1P70348 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gcm1P70348 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gcm1P70348 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gcm1P70348 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.66■□□□□ 0.1
Gcm1P70348 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gcm1P70348 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gcm1P70348 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gcm1P70348 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.66■□□□□ 0.1
Gcm1P70348 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.66■□□□□ 0.1
Gcm1P70348 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.66■□□□□ 0.1
Gcm1P70348 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.66■□□□□ 0.1
Gcm1P70348 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Gcm1P70348 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gcm1P70348 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gcm1P70348 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.66■□□□□ 0.1
Gcm1P70348 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Gcm1P70348 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gcm1P70348 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gcm1P70348 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gcm1P70348 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gcm1P70348 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gcm1P70348 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gcm1P70348 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gcm1P70348 Gm7290-201ENSMUST00000104990 617 ntBASIC15.65■□□□□ 0.1
Gcm1P70348 Gm12918-201ENSMUST00000120234 636 ntBASIC15.65■□□□□ 0.1
Gcm1P70348 Gm15710-201ENSMUST00000121821 636 ntBASIC15.65■□□□□ 0.1
Gcm1P70348 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gcm1P70348 Mir5133-201ENSMUST00000174955 77 ntBASIC15.65■□□□□ 0.1
Gcm1P70348 Gm5075-201ENSMUST00000196916 622 ntBASIC15.65■□□□□ 0.1
Gcm1P70348 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gcm1P70348 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gcm1P70348 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gcm1P70348 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gcm1P70348 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.65■□□□□ 0.1
Gcm1P70348 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.65■□□□□ 0.1
Gcm1P70348 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.65■□□□□ 0.1
Gcm1P70348 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Gcm1P70348 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.65■□□□□ 0.1
Gcm1P70348 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gcm1P70348 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gcm1P70348 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Gcm1P70348 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gcm1P70348 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Gcm1P70348 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gcm1P70348 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gcm1P70348 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gcm1P70348 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.64■□□□□ 0.09
Gcm1P70348 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Gcm1P70348 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gcm1P70348 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gcm1P70348 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gcm1P70348 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gcm1P70348 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gcm1P70348 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gcm1P70348 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gcm1P70348 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Gcm1P70348 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Gcm1P70348 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gcm1P70348 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gcm1P70348 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.63■□□□□ 0.09
Gcm1P70348 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gcm1P70348 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.63■□□□□ 0.09
Gcm1P70348 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Gcm1P70348 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.63■□□□□ 0.09
Gcm1P70348 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.63■□□□□ 0.09
Gcm1P70348 Gm6420-201ENSMUST00000193885 723 ntBASIC15.63■□□□□ 0.09
Gcm1P70348 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.63■□□□□ 0.09
Gcm1P70348 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.63■□□□□ 0.09
Gcm1P70348 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Gcm1P70348 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gcm1P70348 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms