Protein–RNA interactions for Protein: P70339

Frat1, Proto-oncogene FRAT1, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frat1P70339 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Frat1P70339 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.38■□□□□ 0.85
Frat1P70339 Gm10232-201ENSMUST00000089221 720 ntBASIC20.38■□□□□ 0.85
Frat1P70339 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Frat1P70339 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Frat1P70339 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Frat1P70339 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Frat1P70339 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Frat1P70339 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Frat1P70339 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.37■□□□□ 0.85
Frat1P70339 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.37■□□□□ 0.85
Frat1P70339 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.37■□□□□ 0.85
Frat1P70339 Gm40881-201ENSMUST00000223397 166 ntBASIC20.37■□□□□ 0.85
Frat1P70339 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Frat1P70339 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Frat1P70339 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Frat1P70339 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
Frat1P70339 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.37■□□□□ 0.85
Frat1P70339 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Frat1P70339 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Frat1P70339 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Frat1P70339 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Frat1P70339 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Frat1P70339 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Frat1P70339 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Frat1P70339 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Frat1P70339 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.36■□□□□ 0.85
Frat1P70339 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.36■□□□□ 0.85
Frat1P70339 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Frat1P70339 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Frat1P70339 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Frat1P70339 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Frat1P70339 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Frat1P70339 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Frat1P70339 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.35■□□□□ 0.85
Frat1P70339 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Frat1P70339 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Frat1P70339 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Frat1P70339 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Frat1P70339 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.35■□□□□ 0.85
Frat1P70339 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Frat1P70339 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Frat1P70339 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Frat1P70339 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Frat1P70339 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Frat1P70339 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Frat1P70339 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Frat1P70339 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Frat1P70339 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Frat1P70339 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Frat1P70339 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Frat1P70339 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Frat1P70339 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Frat1P70339 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.33■□□□□ 0.85
Frat1P70339 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.33■□□□□ 0.84
Frat1P70339 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Frat1P70339 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Frat1P70339 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Frat1P70339 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Frat1P70339 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Frat1P70339 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Frat1P70339 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Frat1P70339 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Frat1P70339 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Frat1P70339 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Frat1P70339 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Frat1P70339 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Frat1P70339 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Frat1P70339 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Frat1P70339 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Frat1P70339 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Frat1P70339 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Frat1P70339 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
Frat1P70339 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frat1P70339 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Frat1P70339 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frat1P70339 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frat1P70339 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Frat1P70339 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frat1P70339 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frat1P70339 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frat1P70339 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.31■□□□□ 0.84
Frat1P70339 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frat1P70339 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Frat1P70339 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Frat1P70339 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Frat1P70339 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Frat1P70339 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Frat1P70339 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.3■□□□□ 0.84
Frat1P70339 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Frat1P70339 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Frat1P70339 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Frat1P70339 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.3■□□□□ 0.84
Frat1P70339 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Frat1P70339 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Frat1P70339 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Frat1P70339 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Frat1P70339 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Frat1P70339 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.29■□□□□ 0.84
Frat1P70339 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms