Protein–RNA interactions for Protein: P62915

Gtf2b, Transcription initiation factor IIB, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2bP62915 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gtf2bP62915 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gtf2bP62915 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gtf2bP62915 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Gtf2bP62915 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.33■□□□□ 0.85
Gtf2bP62915 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.33■□□□□ 0.85
Gtf2bP62915 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Gtf2bP62915 Gm6365-201ENSMUST00000054711 744 ntBASIC20.33■□□□□ 0.85
Gtf2bP62915 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gtf2bP62915 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2bP62915 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2bP62915 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2bP62915 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2bP62915 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.32■□□□□ 0.84
Gtf2bP62915 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.32■□□□□ 0.84
Gtf2bP62915 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2bP62915 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.32■□□□□ 0.84
Gtf2bP62915 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2bP62915 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.32■□□□□ 0.84
Gtf2bP62915 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2bP62915 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Gtf2bP62915 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2bP62915 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Gtf2bP62915 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2bP62915 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gtf2bP62915 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Gtf2bP62915 Iqck-206ENSMUST00000208658 2891 ntBASIC20.32■□□□□ 0.84
Gtf2bP62915 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2bP62915 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Gtf2bP62915 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2bP62915 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.31■□□□□ 0.84
Gtf2bP62915 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2bP62915 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2bP62915 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2bP62915 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2bP62915 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2bP62915 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.31■□□□□ 0.84
Gtf2bP62915 Gm7290-201ENSMUST00000104990 617 ntBASIC20.31■□□□□ 0.84
Gtf2bP62915 Gm12918-201ENSMUST00000120234 636 ntBASIC20.31■□□□□ 0.84
Gtf2bP62915 Gm15710-201ENSMUST00000121821 636 ntBASIC20.31■□□□□ 0.84
Gtf2bP62915 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2bP62915 Gm5075-201ENSMUST00000196916 622 ntBASIC20.31■□□□□ 0.84
Gtf2bP62915 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Gtf2bP62915 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.31■□□□□ 0.84
Gtf2bP62915 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.31■□□□□ 0.84
Gtf2bP62915 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2bP62915 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2bP62915 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gtf2bP62915 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.31■□□□□ 0.84
Gtf2bP62915 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.3■□□□□ 0.84
Gtf2bP62915 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gtf2bP62915 Gm12933-201ENSMUST00000120203 872 ntBASIC20.3■□□□□ 0.84
Gtf2bP62915 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gtf2bP62915 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gtf2bP62915 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Gtf2bP62915 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.3■□□□□ 0.84
Gtf2bP62915 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gtf2bP62915 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf2bP62915 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf2bP62915 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf2bP62915 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf2bP62915 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf2bP62915 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf2bP62915 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Gtf2bP62915 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
Gtf2bP62915 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.29■□□□□ 0.84
Gtf2bP62915 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.29■□□□□ 0.84
Gtf2bP62915 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf2bP62915 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.29■□□□□ 0.84
Gtf2bP62915 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gtf2bP62915 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf2bP62915 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf2bP62915 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.28■□□□□ 0.84
Gtf2bP62915 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Gtf2bP62915 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf2bP62915 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Gtf2bP62915 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf2bP62915 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf2bP62915 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf2bP62915 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Gtf2bP62915 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf2bP62915 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf2bP62915 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf2bP62915 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gtf2bP62915 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.27■□□□□ 0.84
Gtf2bP62915 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf2bP62915 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Gtf2bP62915 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf2bP62915 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf2bP62915 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf2bP62915 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf2bP62915 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gtf2bP62915 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Gtf2bP62915 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gtf2bP62915 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf2bP62915 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf2bP62915 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf2bP62915 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf2bP62915 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gtf2bP62915 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms