Protein–RNA interactions for Protein: P56203

Ctsw, Cathepsin W, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtswP56203 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtswP56203 Gm6365-201ENSMUST00000054711 744 ntBASIC19.41■□□□□ 0.7
CtswP56203 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.41■□□□□ 0.7
CtswP56203 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.41■□□□□ 0.7
CtswP56203 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtswP56203 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtswP56203 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CtswP56203 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CtswP56203 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.4■□□□□ 0.7
CtswP56203 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtswP56203 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtswP56203 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtswP56203 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.4■□□□□ 0.7
CtswP56203 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CtswP56203 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CtswP56203 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CtswP56203 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.4■□□□□ 0.7
CtswP56203 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtswP56203 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtswP56203 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.4■□□□□ 0.7
CtswP56203 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtswP56203 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtswP56203 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtswP56203 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtswP56203 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CtswP56203 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CtswP56203 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CtswP56203 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CtswP56203 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CtswP56203 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CtswP56203 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CtswP56203 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CtswP56203 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.39■□□□□ 0.69
CtswP56203 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CtswP56203 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CtswP56203 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CtswP56203 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CtswP56203 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CtswP56203 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CtswP56203 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.38■□□□□ 0.69
CtswP56203 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.38■□□□□ 0.69
CtswP56203 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CtswP56203 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CtswP56203 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CtswP56203 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.37■□□□□ 0.69
CtswP56203 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CtswP56203 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.37■□□□□ 0.69
CtswP56203 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CtswP56203 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CtswP56203 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CtswP56203 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CtswP56203 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
CtswP56203 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CtswP56203 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CtswP56203 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CtswP56203 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CtswP56203 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CtswP56203 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CtswP56203 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CtswP56203 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CtswP56203 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CtswP56203 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CtswP56203 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
CtswP56203 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CtswP56203 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CtswP56203 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.36■□□□□ 0.69
CtswP56203 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CtswP56203 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CtswP56203 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CtswP56203 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CtswP56203 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CtswP56203 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CtswP56203 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.35■□□□□ 0.69
CtswP56203 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CtswP56203 Gm13148-201ENSMUST00000118892 745 ntBASIC19.35■□□□□ 0.69
CtswP56203 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.35■□□□□ 0.69
CtswP56203 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CtswP56203 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CtswP56203 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.35■□□□□ 0.69
CtswP56203 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.35■□□□□ 0.69
CtswP56203 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.34■□□□□ 0.69
CtswP56203 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CtswP56203 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.34■□□□□ 0.69
CtswP56203 Gm6211-202ENSMUST00000167849 925 ntBASIC19.34■□□□□ 0.69
CtswP56203 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.34■□□□□ 0.69
CtswP56203 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CtswP56203 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CtswP56203 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CtswP56203 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
CtswP56203 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.34■□□□□ 0.69
CtswP56203 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CtswP56203 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CtswP56203 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CtswP56203 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CtswP56203 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CtswP56203 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CtswP56203 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CtswP56203 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CtswP56203 Mir5133-201ENSMUST00000174955 77 ntBASIC19.33■□□□□ 0.68
CtswP56203 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms