Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NcanP55066 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
NcanP55066 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NcanP55066 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NcanP55066 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NcanP55066 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NcanP55066 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NcanP55066 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NcanP55066 Flg-201ENSMUST00000050758 1488 ntBASIC19.98■□□□□ 0.79
NcanP55066 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NcanP55066 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NcanP55066 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NcanP55066 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NcanP55066 Ank2-226ENSMUST00000189368 339 ntBASIC19.97■□□□□ 0.79
NcanP55066 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.97■□□□□ 0.79
NcanP55066 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
NcanP55066 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.97■□□□□ 0.79
NcanP55066 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.97■□□□□ 0.79
NcanP55066 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NcanP55066 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NcanP55066 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NcanP55066 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NcanP55066 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NcanP55066 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NcanP55066 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NcanP55066 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NcanP55066 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.96■□□□□ 0.79
NcanP55066 Gm23634-201ENSMUST00000175071 91 ntBASIC19.96■□□□□ 0.79
NcanP55066 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.96■□□□□ 0.79
NcanP55066 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.96■□□□□ 0.79
NcanP55066 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
NcanP55066 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.96■□□□□ 0.79
NcanP55066 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NcanP55066 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NcanP55066 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NcanP55066 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.95■□□□□ 0.78
NcanP55066 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NcanP55066 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NcanP55066 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NcanP55066 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NcanP55066 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.95■□□□□ 0.78
NcanP55066 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NcanP55066 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NcanP55066 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NcanP55066 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NcanP55066 Gm6345-202ENSMUST00000180900 204 ntBASIC19.94■□□□□ 0.78
NcanP55066 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.94■□□□□ 0.78
NcanP55066 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NcanP55066 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NcanP55066 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NcanP55066 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.94■□□□□ 0.78
NcanP55066 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
NcanP55066 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NcanP55066 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NcanP55066 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NcanP55066 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NcanP55066 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
NcanP55066 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NcanP55066 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NcanP55066 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NcanP55066 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NcanP55066 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NcanP55066 Gm17971-201ENSMUST00000190239 806 ntBASIC19.93■□□□□ 0.78
NcanP55066 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NcanP55066 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NcanP55066 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NcanP55066 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NcanP55066 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.93■□□□□ 0.78
NcanP55066 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
NcanP55066 Gm3375-201ENSMUST00000203929 796 ntBASIC19.92■□□□□ 0.78
NcanP55066 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NcanP55066 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NcanP55066 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NcanP55066 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NcanP55066 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NcanP55066 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
NcanP55066 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NcanP55066 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NcanP55066 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NcanP55066 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NcanP55066 Gm14859-201ENSMUST00000117752 357 ntBASIC19.91■□□□□ 0.78
NcanP55066 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NcanP55066 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.91■□□□□ 0.78
NcanP55066 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.91■□□□□ 0.78
NcanP55066 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NcanP55066 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NcanP55066 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NcanP55066 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NcanP55066 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NcanP55066 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NcanP55066 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NcanP55066 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NcanP55066 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.9■□□□□ 0.78
NcanP55066 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.9■□□□□ 0.78
NcanP55066 Gm42545-201ENSMUST00000202755 922 ntBASIC19.9■□□□□ 0.78
NcanP55066 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NcanP55066 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NcanP55066 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NcanP55066 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NcanP55066 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms