Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.72■□□□□ 0.75
Ephb3P54754 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ephb3P54754 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ephb3P54754 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ephb3P54754 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ephb3P54754 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ephb3P54754 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ephb3P54754 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.71■□□□□ 0.75
Ephb3P54754 Gm10231-201ENSMUST00000181584 441 ntBASIC19.71■□□□□ 0.75
Ephb3P54754 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ephb3P54754 Gm10175-202ENSMUST00000208752 441 ntBASIC19.71■□□□□ 0.75
Ephb3P54754 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ephb3P54754 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ephb3P54754 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ephb3P54754 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ephb3P54754 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ephb3P54754 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ephb3P54754 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ephb3P54754 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ephb3P54754 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ephb3P54754 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ephb3P54754 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.7■□□□□ 0.74
Ephb3P54754 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ephb3P54754 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ephb3P54754 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ephb3P54754 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ephb3P54754 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ephb3P54754 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ephb3P54754 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ephb3P54754 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ephb3P54754 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ephb3P54754 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.69■□□□□ 0.74
Ephb3P54754 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.69■□□□□ 0.74
Ephb3P54754 Gm43799-201ENSMUST00000201845 579 ntBASIC19.69■□□□□ 0.74
Ephb3P54754 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.69■□□□□ 0.74
Ephb3P54754 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ephb3P54754 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ephb3P54754 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ephb3P54754 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ephb3P54754 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ephb3P54754 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ephb3P54754 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ephb3P54754 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ephb3P54754 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ephb3P54754 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ephb3P54754 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ephb3P54754 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.68■□□□□ 0.74
Ephb3P54754 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ephb3P54754 Gm5417-201ENSMUST00000079706 384 ntBASIC19.68■□□□□ 0.74
Ephb3P54754 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ephb3P54754 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ephb3P54754 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ephb3P54754 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ephb3P54754 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ephb3P54754 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ephb3P54754 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ephb3P54754 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ephb3P54754 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.67■□□□□ 0.74
Ephb3P54754 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ephb3P54754 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.67■□□□□ 0.74
Ephb3P54754 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ephb3P54754 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ephb3P54754 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.67■□□□□ 0.74
Ephb3P54754 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.66■□□□□ 0.74
Ephb3P54754 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ephb3P54754 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ephb3P54754 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ephb3P54754 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.66■□□□□ 0.74
Ephb3P54754 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ephb3P54754 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ephb3P54754 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ephb3P54754 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ephb3P54754 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ephb3P54754 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ephb3P54754 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ephb3P54754 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ephb3P54754 Gm6433-201ENSMUST00000118634 875 ntBASIC19.65■□□□□ 0.74
Ephb3P54754 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ephb3P54754 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Ephb3P54754 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Ephb3P54754 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ephb3P54754 Gm10819-201ENSMUST00000099988 561 ntBASIC19.65■□□□□ 0.74
Ephb3P54754 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ephb3P54754 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ephb3P54754 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ephb3P54754 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ephb3P54754 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ephb3P54754 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ephb3P54754 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ephb3P54754 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ephb3P54754 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Ephb3P54754 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Ephb3P54754 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.64■□□□□ 0.73
Ephb3P54754 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.64■□□□□ 0.73
Ephb3P54754 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ephb3P54754 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ephb3P54754 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ephb3P54754 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ephb3P54754 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ephb3P54754 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms