Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Msh6P54276 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC23.95■■□□□ 1.42
Msh6P54276 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC23.95■■□□□ 1.42
Msh6P54276 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
Msh6P54276 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Msh6P54276 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Msh6P54276 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Msh6P54276 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Msh6P54276 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Msh6P54276 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Msh6P54276 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Msh6P54276 Gm11249-201ENSMUST00000117071 859 ntBASIC23.94■■□□□ 1.42
Msh6P54276 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Msh6P54276 Krtap5-1-202ENSMUST00000188274 742 ntBASIC23.94■■□□□ 1.42
Msh6P54276 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Msh6P54276 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Msh6P54276 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Msh6P54276 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
Msh6P54276 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Msh6P54276 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
Msh6P54276 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Msh6P54276 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC23.93■■□□□ 1.42
Msh6P54276 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Msh6P54276 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC23.93■■□□□ 1.42
Msh6P54276 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Msh6P54276 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Msh6P54276 Gm18688-201ENSMUST00000204695 1859 ntBASIC23.93■■□□□ 1.42
Msh6P54276 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Msh6P54276 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Msh6P54276 AC126028.2-201ENSMUST00000228100 1833 ntBASIC23.92■■□□□ 1.42
Msh6P54276 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Msh6P54276 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
Msh6P54276 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Msh6P54276 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Msh6P54276 AL672049.1-201ENSMUST00000197943 91 ntBASIC23.92■■□□□ 1.42
Msh6P54276 Gm44549-201ENSMUST00000208351 577 ntBASIC23.92■■□□□ 1.42
Msh6P54276 AC130671.1-201ENSMUST00000227384 1237 ntBASIC23.92■■□□□ 1.42
Msh6P54276 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Msh6P54276 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Msh6P54276 Gm21596-201ENSMUST00000178049 1316 ntBASIC23.92■■□□□ 1.42
Msh6P54276 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Msh6P54276 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
Msh6P54276 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Msh6P54276 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Msh6P54276 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC23.92■■□□□ 1.42
Msh6P54276 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Msh6P54276 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Msh6P54276 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Msh6P54276 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Msh6P54276 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Msh6P54276 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Msh6P54276 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Msh6P54276 AC153881.1-201ENSMUST00000214448 284 ntBASIC23.91■■□□□ 1.42
Msh6P54276 AC154649.1-201ENSMUST00000227392 384 ntBASIC23.91■■□□□ 1.42
Msh6P54276 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Msh6P54276 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Msh6P54276 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Msh6P54276 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Msh6P54276 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Msh6P54276 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Msh6P54276 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC23.91■■□□□ 1.42
Msh6P54276 Gm19094-201ENSMUST00000209791 1246 ntBASIC23.91■■□□□ 1.42
Msh6P54276 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Msh6P54276 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
Msh6P54276 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Msh6P54276 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
Msh6P54276 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Msh6P54276 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Msh6P54276 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Msh6P54276 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Msh6P54276 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Msh6P54276 Gm10167-201ENSMUST00000150411 1479 ntBASIC23.89■■□□□ 1.42
Msh6P54276 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Msh6P54276 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Msh6P54276 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Msh6P54276 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Msh6P54276 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.41
Msh6P54276 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Msh6P54276 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Msh6P54276 Gm18666-201ENSMUST00000190039 958 ntBASIC23.89■■□□□ 1.41
Msh6P54276 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Msh6P54276 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Msh6P54276 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Msh6P54276 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Msh6P54276 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Msh6P54276 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Msh6P54276 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Msh6P54276 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Msh6P54276 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Msh6P54276 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Msh6P54276 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC23.88■■□□□ 1.41
Msh6P54276 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC23.88■■□□□ 1.41
Msh6P54276 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC23.88■■□□□ 1.41
Msh6P54276 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Msh6P54276 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC23.88■■□□□ 1.41
Msh6P54276 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC23.88■■□□□ 1.41
Msh6P54276 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Msh6P54276 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Msh6P54276 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Msh6P54276 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms