Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sox1P53783 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sox1P53783 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sox1P53783 AA386476-201ENSMUST00000098781 1665 ntBASIC19.24■□□□□ 0.67
Sox1P53783 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox1P53783 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sox1P53783 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sox1P53783 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Sox1P53783 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Sox1P53783 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox1P53783 Gm11927-201ENSMUST00000118472 759 ntBASIC19.24■□□□□ 0.67
Sox1P53783 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.24■□□□□ 0.67
Sox1P53783 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sox1P53783 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox1P53783 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sox1P53783 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox1P53783 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.24■□□□□ 0.67
Sox1P53783 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.24■□□□□ 0.67
Sox1P53783 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox1P53783 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox1P53783 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox1P53783 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.24■□□□□ 0.67
Sox1P53783 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox1P53783 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sox1P53783 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox1P53783 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.23■□□□□ 0.67
Sox1P53783 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox1P53783 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sox1P53783 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox1P53783 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Sox1P53783 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox1P53783 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox1P53783 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox1P53783 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sox1P53783 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox1P53783 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox1P53783 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox1P53783 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox1P53783 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox1P53783 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox1P53783 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sox1P53783 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sox1P53783 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.22■□□□□ 0.67
Sox1P53783 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sox1P53783 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox1P53783 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sox1P53783 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox1P53783 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox1P53783 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sox1P53783 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sox1P53783 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox1P53783 Gm12382-201ENSMUST00000122005 922 ntBASIC19.21■□□□□ 0.67
Sox1P53783 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox1P53783 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox1P53783 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sox1P53783 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox1P53783 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sox1P53783 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sox1P53783 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sox1P53783 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox1P53783 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox1P53783 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sox1P53783 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sox1P53783 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.2■□□□□ 0.66
Sox1P53783 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox1P53783 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox1P53783 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox1P53783 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Sox1P53783 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox1P53783 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sox1P53783 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox1P53783 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.19■□□□□ 0.66
Sox1P53783 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.19■□□□□ 0.66
Sox1P53783 Gm28033-201ENSMUST00000184224 96 ntBASIC19.19■□□□□ 0.66
Sox1P53783 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox1P53783 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox1P53783 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox1P53783 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox1P53783 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox1P53783 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sox1P53783 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox1P53783 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sox1P53783 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Sox1P53783 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.18■□□□□ 0.66
Sox1P53783 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sox1P53783 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sox1P53783 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sox1P53783 Timm23-208ENSMUST00000226683 750 ntBASIC19.18■□□□□ 0.66
Sox1P53783 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox1P53783 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox1P53783 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Sox1P53783 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Sox1P53783 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox1P53783 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox1P53783 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sox1P53783 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sox1P53783 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox1P53783 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox1P53783 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox1P53783 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms