Protein–RNA interactions for Protein: P51675

Ccr1, C-C chemokine receptor type 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1P51675 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccr1P51675 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ccr1P51675 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccr1P51675 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccr1P51675 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccr1P51675 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccr1P51675 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.46■□□□□ 0.87
Ccr1P51675 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccr1P51675 Gm8520-201ENSMUST00000186517 868 ntBASIC20.46■□□□□ 0.87
Ccr1P51675 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccr1P51675 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ccr1P51675 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ccr1P51675 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccr1P51675 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccr1P51675 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccr1P51675 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccr1P51675 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccr1P51675 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccr1P51675 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccr1P51675 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ccr1P51675 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccr1P51675 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccr1P51675 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccr1P51675 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccr1P51675 Gm22240-201ENSMUST00000175225 82 ntBASIC20.45■□□□□ 0.86
Ccr1P51675 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.45■□□□□ 0.86
Ccr1P51675 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccr1P51675 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccr1P51675 Golph3-202ENSMUST00000226517 2359 ntBASIC20.45■□□□□ 0.86
Ccr1P51675 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccr1P51675 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccr1P51675 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ccr1P51675 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccr1P51675 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccr1P51675 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccr1P51675 Trmt13-210ENSMUST00000198454 880 ntBASIC20.44■□□□□ 0.86
Ccr1P51675 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccr1P51675 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccr1P51675 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccr1P51675 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Ccr1P51675 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccr1P51675 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccr1P51675 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccr1P51675 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccr1P51675 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.43■□□□□ 0.86
Ccr1P51675 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccr1P51675 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.43■□□□□ 0.86
Ccr1P51675 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccr1P51675 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccr1P51675 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccr1P51675 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccr1P51675 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccr1P51675 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.42■□□□□ 0.86
Ccr1P51675 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.42■□□□□ 0.86
Ccr1P51675 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccr1P51675 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccr1P51675 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ccr1P51675 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccr1P51675 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccr1P51675 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccr1P51675 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccr1P51675 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccr1P51675 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccr1P51675 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccr1P51675 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Ccr1P51675 Gm13168-201ENSMUST00000121771 632 ntBASIC20.41■□□□□ 0.86
Ccr1P51675 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccr1P51675 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.41■□□□□ 0.86
Ccr1P51675 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ccr1P51675 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccr1P51675 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccr1P51675 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccr1P51675 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Ccr1P51675 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccr1P51675 Gm12896-201ENSMUST00000118430 226 ntBASIC20.4■□□□□ 0.86
Ccr1P51675 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.4■□□□□ 0.86
Ccr1P51675 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.4■□□□□ 0.86
Ccr1P51675 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.4■□□□□ 0.86
Ccr1P51675 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccr1P51675 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.4■□□□□ 0.86
Ccr1P51675 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccr1P51675 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccr1P51675 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccr1P51675 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccr1P51675 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccr1P51675 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Ccr1P51675 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Ccr1P51675 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.39■□□□□ 0.85
Ccr1P51675 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccr1P51675 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccr1P51675 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccr1P51675 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Ccr1P51675 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.38■□□□□ 0.85
Ccr1P51675 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccr1P51675 Gm27275-201ENSMUST00000184318 272 ntBASIC20.38■□□□□ 0.85
Ccr1P51675 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccr1P51675 Gm44549-201ENSMUST00000208351 577 ntBASIC20.38■□□□□ 0.85
Ccr1P51675 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccr1P51675 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccr1P51675 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms