Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TubP50586 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TubP50586 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TubP50586 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TubP50586 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TubP50586 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TubP50586 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TubP50586 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TubP50586 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TubP50586 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TubP50586 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TubP50586 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TubP50586 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TubP50586 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
TubP50586 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TubP50586 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.19■□□□□ 0.66
TubP50586 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TubP50586 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TubP50586 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.19■□□□□ 0.66
TubP50586 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.19■□□□□ 0.66
TubP50586 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TubP50586 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TubP50586 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TubP50586 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TubP50586 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TubP50586 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.18■□□□□ 0.66
TubP50586 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.18■□□□□ 0.66
TubP50586 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TubP50586 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TubP50586 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TubP50586 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TubP50586 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.18■□□□□ 0.66
TubP50586 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TubP50586 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TubP50586 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TubP50586 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TubP50586 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TubP50586 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TubP50586 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TubP50586 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TubP50586 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TubP50586 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TubP50586 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TubP50586 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TubP50586 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TubP50586 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TubP50586 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TubP50586 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TubP50586 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TubP50586 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TubP50586 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TubP50586 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TubP50586 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.16■□□□□ 0.66
TubP50586 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TubP50586 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TubP50586 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TubP50586 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TubP50586 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TubP50586 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TubP50586 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TubP50586 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TubP50586 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.15■□□□□ 0.66
TubP50586 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.15■□□□□ 0.66
TubP50586 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TubP50586 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TubP50586 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TubP50586 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TubP50586 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TubP50586 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TubP50586 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TubP50586 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TubP50586 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TubP50586 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TubP50586 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TubP50586 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.14■□□□□ 0.65
TubP50586 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TubP50586 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TubP50586 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TubP50586 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.14■□□□□ 0.65
TubP50586 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TubP50586 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TubP50586 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TubP50586 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TubP50586 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TubP50586 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TubP50586 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TubP50586 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
TubP50586 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.13■□□□□ 0.65
TubP50586 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.13■□□□□ 0.65
TubP50586 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
TubP50586 Gm6365-201ENSMUST00000054711 744 ntBASIC19.13■□□□□ 0.65
TubP50586 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TubP50586 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TubP50586 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TubP50586 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TubP50586 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TubP50586 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TubP50586 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TubP50586 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TubP50586 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms