Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.43■□□□□ 0.06
Hist1h1aP43275 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h1aP43275 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1aP43275 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Hist1h1aP43275 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Hist1h1aP43275 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1aP43275 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1aP43275 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Hist1h1aP43275 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1aP43275 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1aP43275 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1aP43275 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Hist1h1aP43275 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1aP43275 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.42■□□□□ 0.06
Hist1h1aP43275 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1aP43275 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1aP43275 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h1aP43275 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.41■□□□□ 0.06
Hist1h1aP43275 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Serp2-204ENSMUST00000228055 705 ntBASIC15.41■□□□□ 0.06
Hist1h1aP43275 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.41■□□□□ 0.06
Hist1h1aP43275 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h1aP43275 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Hist1h1aP43275 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.4■□□□□ 0.06
Hist1h1aP43275 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.4■□□□□ 0.06
Hist1h1aP43275 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1aP43275 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1aP43275 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1aP43275 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Hist1h1aP43275 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1aP43275 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1aP43275 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1aP43275 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Hist1h1aP43275 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1aP43275 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Hist1h1aP43275 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Hist1h1aP43275 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1aP43275 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.4■□□□□ 0.06
Hist1h1aP43275 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1aP43275 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1aP43275 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h1aP43275 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1aP43275 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1aP43275 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1aP43275 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Hist1h1aP43275 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1aP43275 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1aP43275 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1aP43275 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.39■□□□□ 0.05
Hist1h1aP43275 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.39■□□□□ 0.05
Hist1h1aP43275 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1aP43275 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Hist1h1aP43275 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1aP43275 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1aP43275 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Hist1h1aP43275 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms