Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.3■□□□□ 0.68
Msh2P43247 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.3■□□□□ 0.68
Msh2P43247 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Msh2P43247 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Msh2P43247 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Msh2P43247 Smad6-203ENSMUST00000179458 273 ntBASIC19.3■□□□□ 0.68
Msh2P43247 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.3■□□□□ 0.68
Msh2P43247 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh2P43247 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Msh2P43247 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh2P43247 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.3■□□□□ 0.68
Msh2P43247 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh2P43247 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh2P43247 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh2P43247 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.29■□□□□ 0.68
Msh2P43247 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msh2P43247 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msh2P43247 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh2P43247 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh2P43247 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msh2P43247 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Msh2P43247 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh2P43247 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Msh2P43247 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msh2P43247 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.29■□□□□ 0.68
Msh2P43247 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.29■□□□□ 0.68
Msh2P43247 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh2P43247 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh2P43247 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh2P43247 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msh2P43247 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh2P43247 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh2P43247 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh2P43247 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh2P43247 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh2P43247 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.28■□□□□ 0.68
Msh2P43247 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh2P43247 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Msh2P43247 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh2P43247 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh2P43247 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Msh2P43247 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh2P43247 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh2P43247 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh2P43247 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Msh2P43247 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh2P43247 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Msh2P43247 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.27■□□□□ 0.68
Msh2P43247 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Msh2P43247 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh2P43247 Gm15039-201ENSMUST00000118914 875 ntBASIC19.27■□□□□ 0.68
Msh2P43247 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Msh2P43247 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Msh2P43247 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.27■□□□□ 0.68
Msh2P43247 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh2P43247 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.27■□□□□ 0.68
Msh2P43247 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh2P43247 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Msh2P43247 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Msh2P43247 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Msh2P43247 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh2P43247 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh2P43247 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Msh2P43247 Gm26833-201ENSMUST00000180899 440 ntBASIC19.26■□□□□ 0.67
Msh2P43247 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Msh2P43247 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Msh2P43247 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh2P43247 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh2P43247 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Msh2P43247 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh2P43247 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh2P43247 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.25■□□□□ 0.67
Msh2P43247 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh2P43247 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.25■□□□□ 0.67
Msh2P43247 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Msh2P43247 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Msh2P43247 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.25■□□□□ 0.67
Msh2P43247 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh2P43247 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Msh2P43247 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh2P43247 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Msh2P43247 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Msh2P43247 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.24■□□□□ 0.67
Msh2P43247 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Msh2P43247 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh2P43247 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh2P43247 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh2P43247 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh2P43247 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh2P43247 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Msh2P43247 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh2P43247 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh2P43247 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh2P43247 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh2P43247 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh2P43247 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh2P43247 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.24■□□□□ 0.67
Msh2P43247 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh2P43247 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh2P43247 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms