Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Slc6a1P31648 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.1■□□□□ 0.17
Slc6a1P31648 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a1P31648 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a1P31648 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a1P31648 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a1P31648 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Slc6a1P31648 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a1P31648 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a1P31648 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a1P31648 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a1P31648 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a1P31648 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Slc6a1P31648 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.09■□□□□ 0.17
Slc6a1P31648 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a1P31648 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a1P31648 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
Slc6a1P31648 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.09■□□□□ 0.17
Slc6a1P31648 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a1P31648 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a1P31648 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Slc6a1P31648 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Slc6a1P31648 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a1P31648 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a1P31648 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a1P31648 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.08■□□□□ 0.16
Slc6a1P31648 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a1P31648 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
Slc6a1P31648 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Slc6a1P31648 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a1P31648 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.08■□□□□ 0.16
Slc6a1P31648 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a1P31648 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a1P31648 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a1P31648 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a1P31648 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a1P31648 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a1P31648 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a1P31648 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a1P31648 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a1P31648 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a1P31648 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a1P31648 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.07■□□□□ 0.16
Slc6a1P31648 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a1P31648 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.07■□□□□ 0.16
Slc6a1P31648 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a1P31648 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a1P31648 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a1P31648 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a1P31648 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a1P31648 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a1P31648 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.07■□□□□ 0.16
Slc6a1P31648 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Slc6a1P31648 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a1P31648 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Slc6a1P31648 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a1P31648 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a1P31648 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a1P31648 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a1P31648 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.06■□□□□ 0.16
Slc6a1P31648 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a1P31648 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.06■□□□□ 0.16
Slc6a1P31648 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.06■□□□□ 0.16
Slc6a1P31648 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.06■□□□□ 0.16
Slc6a1P31648 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.06■□□□□ 0.16
Slc6a1P31648 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a1P31648 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Slc6a1P31648 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Slc6a1P31648 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Slc6a1P31648 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Slc6a1P31648 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Slc6a1P31648 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a1P31648 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.05■□□□□ 0.16
Slc6a1P31648 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.05■□□□□ 0.16
Slc6a1P31648 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a1P31648 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a1P31648 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a1P31648 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.05■□□□□ 0.16
Slc6a1P31648 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a1P31648 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a1P31648 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a1P31648 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a1P31648 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a1P31648 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a1P31648 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a1P31648 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a1P31648 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a1P31648 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.04■□□□□ 0.16
Slc6a1P31648 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a1P31648 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.04■□□□□ 0.16
Slc6a1P31648 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a1P31648 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a1P31648 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a1P31648 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a1P31648 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Slc6a1P31648 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a1P31648 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a1P31648 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a1P31648 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Slc6a1P31648 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms