Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Trmt13-210ENSMUST00000198454 880 ntBASIC18.64■□□□□ 0.57
Nckap1P28660 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.64■□□□□ 0.57
Nckap1P28660 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nckap1P28660 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nckap1P28660 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nckap1P28660 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Nckap1P28660 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nckap1P28660 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nckap1P28660 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nckap1P28660 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nckap1P28660 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nckap1P28660 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nckap1P28660 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nckap1P28660 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.63■□□□□ 0.57
Nckap1P28660 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nckap1P28660 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nckap1P28660 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nckap1P28660 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Nckap1P28660 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nckap1P28660 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nckap1P28660 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.63■□□□□ 0.57
Nckap1P28660 Gm37856-201ENSMUST00000191634 999 ntBASIC18.63■□□□□ 0.57
Nckap1P28660 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nckap1P28660 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nckap1P28660 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nckap1P28660 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
Nckap1P28660 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nckap1P28660 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nckap1P28660 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nckap1P28660 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nckap1P28660 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nckap1P28660 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nckap1P28660 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Nckap1P28660 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nckap1P28660 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Nckap1P28660 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nckap1P28660 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nckap1P28660 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nckap1P28660 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
Nckap1P28660 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nckap1P28660 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nckap1P28660 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nckap1P28660 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nckap1P28660 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nckap1P28660 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nckap1P28660 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nckap1P28660 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.61■□□□□ 0.57
Nckap1P28660 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nckap1P28660 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nckap1P28660 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.61■□□□□ 0.57
Nckap1P28660 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nckap1P28660 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nckap1P28660 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nckap1P28660 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Nckap1P28660 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.6■□□□□ 0.57
Nckap1P28660 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nckap1P28660 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nckap1P28660 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nckap1P28660 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.6■□□□□ 0.57
Nckap1P28660 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nckap1P28660 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.6■□□□□ 0.57
Nckap1P28660 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.6■□□□□ 0.57
Nckap1P28660 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.6■□□□□ 0.57
Nckap1P28660 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.6■□□□□ 0.57
Nckap1P28660 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nckap1P28660 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nckap1P28660 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nckap1P28660 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nckap1P28660 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nckap1P28660 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nckap1P28660 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nckap1P28660 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nckap1P28660 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nckap1P28660 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.59■□□□□ 0.57
Nckap1P28660 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.59■□□□□ 0.57
Nckap1P28660 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.59■□□□□ 0.57
Nckap1P28660 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nckap1P28660 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nckap1P28660 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nckap1P28660 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.59■□□□□ 0.57
Nckap1P28660 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nckap1P28660 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nckap1P28660 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Nckap1P28660 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.59■□□□□ 0.57
Nckap1P28660 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nckap1P28660 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nckap1P28660 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nckap1P28660 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.59■□□□□ 0.57
Nckap1P28660 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nckap1P28660 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Nckap1P28660 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nckap1P28660 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nckap1P28660 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Nckap1P28660 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.58■□□□□ 0.56
Nckap1P28660 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.58■□□□□ 0.56
Nckap1P28660 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nckap1P28660 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nckap1P28660 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nckap1P28660 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nckap1P28660 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms