Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gja4P28235 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
Gja4P28235 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gja4P28235 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.82■□□□□ 0.6
Gja4P28235 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gja4P28235 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gja4P28235 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gja4P28235 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gja4P28235 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gja4P28235 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gja4P28235 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gja4P28235 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gja4P28235 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gja4P28235 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.81■□□□□ 0.6
Gja4P28235 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gja4P28235 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Gja4P28235 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gja4P28235 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gja4P28235 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.81■□□□□ 0.6
Gja4P28235 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gja4P28235 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gja4P28235 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.81■□□□□ 0.6
Gja4P28235 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gja4P28235 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gja4P28235 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gja4P28235 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gja4P28235 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gja4P28235 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gja4P28235 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gja4P28235 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gja4P28235 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.79■□□□□ 0.6
Gja4P28235 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gja4P28235 Gm10698-201ENSMUST00000182663 604 ntBASIC18.79■□□□□ 0.6
Gja4P28235 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.79■□□□□ 0.6
Gja4P28235 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Gja4P28235 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gja4P28235 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gja4P28235 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.79■□□□□ 0.6
Gja4P28235 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gja4P28235 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gja4P28235 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gja4P28235 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gja4P28235 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gja4P28235 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gja4P28235 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gja4P28235 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.78■□□□□ 0.6
Gja4P28235 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gja4P28235 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gja4P28235 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Gja4P28235 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gja4P28235 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.78■□□□□ 0.6
Gja4P28235 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gja4P28235 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gja4P28235 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gja4P28235 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gja4P28235 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gja4P28235 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Gja4P28235 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gja4P28235 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gja4P28235 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Gja4P28235 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gja4P28235 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gja4P28235 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gja4P28235 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gja4P28235 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gja4P28235 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.77■□□□□ 0.6
Gja4P28235 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.77■□□□□ 0.6
Gja4P28235 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gja4P28235 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gja4P28235 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.77■□□□□ 0.59
Gja4P28235 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gja4P28235 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gja4P28235 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gja4P28235 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gja4P28235 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gja4P28235 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gja4P28235 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gja4P28235 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gja4P28235 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gja4P28235 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gja4P28235 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gja4P28235 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gja4P28235 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gja4P28235 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gja4P28235 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Gja4P28235 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gja4P28235 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Gja4P28235 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gja4P28235 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Gja4P28235 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gja4P28235 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gja4P28235 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gja4P28235 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gja4P28235 Gm15378-201ENSMUST00000121894 207 ntBASIC18.74■□□□□ 0.59
Gja4P28235 Gm13158-201ENSMUST00000122007 736 ntBASIC18.74■□□□□ 0.59
Gja4P28235 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Gja4P28235 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.74■□□□□ 0.59
Gja4P28235 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.74■□□□□ 0.59
Gja4P28235 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gja4P28235 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms