Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ccl6P27784 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl6P27784 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ccl6P27784 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.6□□□□□ -0.07
Ccl6P27784 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ccl6P27784 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl6P27784 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Ccl6P27784 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl6P27784 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl6P27784 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl6P27784 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl6P27784 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl6P27784 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl6P27784 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl6P27784 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl6P27784 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Ccl6P27784 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Ccl6P27784 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Ccl6P27784 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl6P27784 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.59□□□□□ -0.07
Ccl6P27784 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccl6P27784 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccl6P27784 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl6P27784 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl6P27784 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl6P27784 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ccl6P27784 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl6P27784 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl6P27784 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl6P27784 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ccl6P27784 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl6P27784 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl6P27784 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl6P27784 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
Ccl6P27784 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccl6P27784 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Ccl6P27784 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccl6P27784 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl6P27784 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ccl6P27784 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Ccl6P27784 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl6P27784 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.58□□□□□ -0.08
Ccl6P27784 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl6P27784 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl6P27784 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl6P27784 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl6P27784 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl6P27784 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl6P27784 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl6P27784 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl6P27784 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl6P27784 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.57□□□□□ -0.08
Ccl6P27784 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl6P27784 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Ccl6P27784 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl6P27784 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl6P27784 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ccl6P27784 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.57□□□□□ -0.08
Ccl6P27784 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl6P27784 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl6P27784 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.56□□□□□ -0.08
Ccl6P27784 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl6P27784 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl6P27784 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl6P27784 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl6P27784 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.56□□□□□ -0.08
Ccl6P27784 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.56□□□□□ -0.08
Ccl6P27784 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ccl6P27784 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl6P27784 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl6P27784 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl6P27784 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl6P27784 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl6P27784 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl6P27784 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl6P27784 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl6P27784 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccl6P27784 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ccl6P27784 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.55□□□□□ -0.08
Ccl6P27784 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl6P27784 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl6P27784 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl6P27784 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl6P27784 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl6P27784 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl6P27784 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl6P27784 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ccl6P27784 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl6P27784 Gm7860-201ENSMUST00000121190 879 ntBASIC14.55□□□□□ -0.08
Ccl6P27784 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.55□□□□□ -0.08
Ccl6P27784 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl6P27784 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Ccl6P27784 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ccl6P27784 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl6P27784 Gm9988-201ENSMUST00000069786 435 ntBASIC14.55□□□□□ -0.08
Ccl6P27784 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.55□□□□□ -0.08
Ccl6P27784 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl6P27784 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ccl6P27784 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccl6P27784 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms