Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf1bP25119 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.35■□□□□ 0.37
Tnfrsf1bP25119 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.35■□□□□ 0.37
Tnfrsf1bP25119 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tnfrsf1bP25119 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf1bP25119 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tnfrsf1bP25119 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.35■□□□□ 0.37
Tnfrsf1bP25119 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf1bP25119 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf1bP25119 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf1bP25119 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf1bP25119 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf1bP25119 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1bP25119 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1bP25119 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.34■□□□□ 0.37
Tnfrsf1bP25119 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.34■□□□□ 0.37
Tnfrsf1bP25119 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tnfrsf1bP25119 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1bP25119 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1bP25119 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1bP25119 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1bP25119 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1bP25119 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1bP25119 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.34■□□□□ 0.37
Tnfrsf1bP25119 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tnfrsf1bP25119 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf1bP25119 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf1bP25119 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf1bP25119 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.33■□□□□ 0.37
Tnfrsf1bP25119 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf1bP25119 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf1bP25119 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf1bP25119 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf1bP25119 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf1bP25119 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf1bP25119 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.33■□□□□ 0.36
Tnfrsf1bP25119 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.33■□□□□ 0.36
Tnfrsf1bP25119 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.33■□□□□ 0.36
Tnfrsf1bP25119 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.33■□□□□ 0.36
Tnfrsf1bP25119 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf1bP25119 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf1bP25119 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf1bP25119 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf1bP25119 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Tnfrsf1bP25119 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf1bP25119 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1bP25119 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1bP25119 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1bP25119 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1bP25119 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1bP25119 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1bP25119 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1bP25119 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1bP25119 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.32■□□□□ 0.36
Tnfrsf1bP25119 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1bP25119 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1bP25119 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1bP25119 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf1bP25119 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.31■□□□□ 0.36
Tnfrsf1bP25119 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1bP25119 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tnfrsf1bP25119 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1bP25119 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1bP25119 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Tnfrsf1bP25119 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1bP25119 Gm37179-201ENSMUST00000194862 823 ntBASIC17.31■□□□□ 0.36
Tnfrsf1bP25119 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1bP25119 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1bP25119 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1bP25119 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1bP25119 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.31■□□□□ 0.36
Tnfrsf1bP25119 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf1bP25119 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf1bP25119 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tnfrsf1bP25119 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf1bP25119 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf1bP25119 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf1bP25119 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf1bP25119 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf1bP25119 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.3■□□□□ 0.36
Tnfrsf1bP25119 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf1bP25119 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf1bP25119 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.3■□□□□ 0.36
Tnfrsf1bP25119 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf1bP25119 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf1bP25119 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf1bP25119 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf1bP25119 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1bP25119 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1bP25119 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1bP25119 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.29■□□□□ 0.36
Tnfrsf1bP25119 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1bP25119 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tnfrsf1bP25119 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1bP25119 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1bP25119 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1bP25119 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1bP25119 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1bP25119 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf1bP25119 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms