Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Irf8P23611 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.28■□□□□ 0.84
Irf8P23611 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Irf8P23611 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.28■□□□□ 0.84
Irf8P23611 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.28■□□□□ 0.84
Irf8P23611 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf8P23611 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Irf8P23611 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf8P23611 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.28■□□□□ 0.84
Irf8P23611 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Irf8P23611 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.27■□□□□ 0.84
Irf8P23611 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.27■□□□□ 0.84
Irf8P23611 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Irf8P23611 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Irf8P23611 Nespas-201ENSMUST00000143738 1083 ntBASIC20.27■□□□□ 0.84
Irf8P23611 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.27■□□□□ 0.84
Irf8P23611 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf8P23611 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf8P23611 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf8P23611 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf8P23611 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf8P23611 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Irf8P23611 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Irf8P23611 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Irf8P23611 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Irf8P23611 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Irf8P23611 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf8P23611 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.26■□□□□ 0.83
Irf8P23611 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf8P23611 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.26■□□□□ 0.83
Irf8P23611 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf8P23611 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Irf8P23611 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Irf8P23611 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf8P23611 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf8P23611 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Irf8P23611 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf8P23611 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Irf8P23611 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Irf8P23611 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Irf8P23611 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf8P23611 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Irf8P23611 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.25■□□□□ 0.83
Irf8P23611 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf8P23611 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Irf8P23611 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.25■□□□□ 0.83
Irf8P23611 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf8P23611 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf8P23611 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Irf8P23611 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.25■□□□□ 0.83
Irf8P23611 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.24■□□□□ 0.83
Irf8P23611 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf8P23611 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf8P23611 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf8P23611 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf8P23611 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf8P23611 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Irf8P23611 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.24■□□□□ 0.83
Irf8P23611 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.24■□□□□ 0.83
Irf8P23611 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.24■□□□□ 0.83
Irf8P23611 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf8P23611 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf8P23611 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Irf8P23611 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Irf8P23611 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf8P23611 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf8P23611 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf8P23611 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf8P23611 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf8P23611 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf8P23611 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Irf8P23611 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf8P23611 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Irf8P23611 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf8P23611 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf8P23611 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Irf8P23611 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf8P23611 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf8P23611 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Irf8P23611 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Irf8P23611 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf8P23611 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Irf8P23611 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Irf8P23611 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf8P23611 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.22■□□□□ 0.83
Irf8P23611 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.22■□□□□ 0.83
Irf8P23611 Gm7291-201ENSMUST00000199147 382 ntBASIC20.22■□□□□ 0.83
Irf8P23611 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Irf8P23611 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Irf8P23611 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf8P23611 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf8P23611 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Irf8P23611 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Irf8P23611 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Irf8P23611 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Irf8P23611 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Irf8P23611 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf8P23611 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.21■□□□□ 0.83
Irf8P23611 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Irf8P23611 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms