Protein–RNA interactions for Protein: P20782

Chrne, Acetylcholine receptor subunit epsilon, mousemouse

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrneP20782 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ChrneP20782 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ChrneP20782 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChrneP20782 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
ChrneP20782 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChrneP20782 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChrneP20782 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChrneP20782 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChrneP20782 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChrneP20782 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.66■□□□□ 0.42
ChrneP20782 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
ChrneP20782 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChrneP20782 Gm7860-201ENSMUST00000121190 879 ntBASIC17.66■□□□□ 0.42
ChrneP20782 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.66■□□□□ 0.42
ChrneP20782 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.66■□□□□ 0.42
ChrneP20782 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ChrneP20782 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ChrneP20782 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChrneP20782 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ChrneP20782 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChrneP20782 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.66■□□□□ 0.42
ChrneP20782 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ChrneP20782 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChrneP20782 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.66■□□□□ 0.42
ChrneP20782 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChrneP20782 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChrneP20782 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ChrneP20782 Gm38205-201ENSMUST00000192243 258 ntBASIC17.65■□□□□ 0.42
ChrneP20782 Gm7514-201ENSMUST00000209475 934 ntBASIC17.65■□□□□ 0.42
ChrneP20782 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChrneP20782 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
ChrneP20782 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ChrneP20782 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ChrneP20782 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ChrneP20782 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
ChrneP20782 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.64■□□□□ 0.42
ChrneP20782 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChrneP20782 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
ChrneP20782 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChrneP20782 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ChrneP20782 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ChrneP20782 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ChrneP20782 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChrneP20782 Gm37179-201ENSMUST00000194862 823 ntBASIC17.64■□□□□ 0.41
ChrneP20782 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.64■□□□□ 0.41
ChrneP20782 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ChrneP20782 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChrneP20782 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChrneP20782 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChrneP20782 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChrneP20782 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChrneP20782 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ChrneP20782 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ChrneP20782 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ChrneP20782 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.64■□□□□ 0.41
ChrneP20782 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ChrneP20782 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ChrneP20782 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.63■□□□□ 0.41
ChrneP20782 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.63■□□□□ 0.41
ChrneP20782 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.63■□□□□ 0.41
ChrneP20782 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ChrneP20782 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ChrneP20782 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ChrneP20782 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ChrneP20782 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ChrneP20782 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.63■□□□□ 0.41
ChrneP20782 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ChrneP20782 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ChrneP20782 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ChrneP20782 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ChrneP20782 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ChrneP20782 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ChrneP20782 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.62■□□□□ 0.41
ChrneP20782 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ChrneP20782 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.62■□□□□ 0.41
ChrneP20782 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ChrneP20782 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.62■□□□□ 0.41
ChrneP20782 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ChrneP20782 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.62■□□□□ 0.41
ChrneP20782 Rarb-207ENSMUST00000225921 2756 ntBASIC17.62■□□□□ 0.41
ChrneP20782 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ChrneP20782 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ChrneP20782 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ChrneP20782 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ChrneP20782 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ChrneP20782 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ChrneP20782 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ChrneP20782 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.61■□□□□ 0.41
ChrneP20782 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ChrneP20782 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ChrneP20782 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.61■□□□□ 0.41
ChrneP20782 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ChrneP20782 Gm12933-201ENSMUST00000120203 872 ntBASIC17.61■□□□□ 0.41
ChrneP20782 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ChrneP20782 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.61■□□□□ 0.41
ChrneP20782 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.61■□□□□ 0.41
ChrneP20782 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ChrneP20782 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.61■□□□□ 0.41
ChrneP20782 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ChrneP20782 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms