Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PdgfaP20033 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PdgfaP20033 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
PdgfaP20033 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfaP20033 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfaP20033 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfaP20033 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.57■□□□□ 0.56
PdgfaP20033 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.57■□□□□ 0.56
PdgfaP20033 Spcs1-204ENSMUST00000226782 949 ntBASIC18.57■□□□□ 0.56
PdgfaP20033 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfaP20033 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfaP20033 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfaP20033 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfaP20033 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.57■□□□□ 0.56
PdgfaP20033 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfaP20033 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PdgfaP20033 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfaP20033 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfaP20033 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfaP20033 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfaP20033 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.56■□□□□ 0.56
PdgfaP20033 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfaP20033 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.56■□□□□ 0.56
PdgfaP20033 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfaP20033 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfaP20033 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.56■□□□□ 0.56
PdgfaP20033 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.56■□□□□ 0.56
PdgfaP20033 Gm42569-201ENSMUST00000200539 472 ntBASIC18.56■□□□□ 0.56
PdgfaP20033 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.56■□□□□ 0.56
PdgfaP20033 Gm10493-201ENSMUST00000097270 612 ntBASIC18.56■□□□□ 0.56
PdgfaP20033 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PdgfaP20033 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfaP20033 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfaP20033 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfaP20033 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfaP20033 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.56■□□□□ 0.56
PdgfaP20033 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PdgfaP20033 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PdgfaP20033 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PdgfaP20033 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PdgfaP20033 Gm27405-201ENSMUST00000184201 112 ntBASIC18.55■□□□□ 0.56
PdgfaP20033 Gm43060-201ENSMUST00000200621 289 ntBASIC18.55■□□□□ 0.56
PdgfaP20033 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.55■□□□□ 0.56
PdgfaP20033 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PdgfaP20033 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PdgfaP20033 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PdgfaP20033 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PdgfaP20033 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.55■□□□□ 0.56
PdgfaP20033 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PdgfaP20033 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.55■□□□□ 0.56
PdgfaP20033 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.55■□□□□ 0.56
PdgfaP20033 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PdgfaP20033 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PdgfaP20033 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PdgfaP20033 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PdgfaP20033 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PdgfaP20033 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.54■□□□□ 0.56
PdgfaP20033 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PdgfaP20033 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.54■□□□□ 0.56
PdgfaP20033 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PdgfaP20033 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PdgfaP20033 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PdgfaP20033 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.54■□□□□ 0.56
PdgfaP20033 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PdgfaP20033 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfaP20033 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfaP20033 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.53■□□□□ 0.56
PdgfaP20033 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PdgfaP20033 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
PdgfaP20033 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PdgfaP20033 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfaP20033 Gm40848-201ENSMUST00000221998 324 ntBASIC18.53■□□□□ 0.56
PdgfaP20033 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.53■□□□□ 0.56
PdgfaP20033 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
PdgfaP20033 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfaP20033 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PdgfaP20033 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfaP20033 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PdgfaP20033 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfaP20033 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfaP20033 Fst-202ENSMUST00000223640 2612 ntBASIC18.53■□□□□ 0.56
PdgfaP20033 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.53■□□□□ 0.56
PdgfaP20033 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.52■□□□□ 0.56
PdgfaP20033 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PdgfaP20033 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PdgfaP20033 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PdgfaP20033 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PdgfaP20033 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.52■□□□□ 0.56
PdgfaP20033 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PdgfaP20033 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PdgfaP20033 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
PdgfaP20033 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PdgfaP20033 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
PdgfaP20033 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PdgfaP20033 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.51■□□□□ 0.55
PdgfaP20033 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PdgfaP20033 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PdgfaP20033 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PdgfaP20033 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PdgfaP20033 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms