Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.32■■□□□ 1
Kcna1P16388 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kcna1P16388 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kcna1P16388 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kcna1P16388 Gm7290-201ENSMUST00000104990 617 ntBASIC21.32■■□□□ 1
Kcna1P16388 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.32■■□□□ 1
Kcna1P16388 Gm12918-201ENSMUST00000120234 636 ntBASIC21.32■■□□□ 1
Kcna1P16388 Gm15710-201ENSMUST00000121821 636 ntBASIC21.32■■□□□ 1
Kcna1P16388 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.32■■□□□ 1
Kcna1P16388 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kcna1P16388 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.32■■□□□ 1
Kcna1P16388 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.32■■□□□ 1
Kcna1P16388 Gm5075-201ENSMUST00000196916 622 ntBASIC21.32■■□□□ 1
Kcna1P16388 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.32■■□□□ 1
Kcna1P16388 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.32■■□□□ 1
Kcna1P16388 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.32■■□□□ 1
Kcna1P16388 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Kcna1P16388 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kcna1P16388 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.32■■□□□ 1
Kcna1P16388 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.32■■□□□ 1
Kcna1P16388 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Kcna1P16388 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Kcna1P16388 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Kcna1P16388 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Kcna1P16388 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Kcna1P16388 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Kcna1P16388 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Kcna1P16388 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Kcna1P16388 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.31■■□□□ 1
Kcna1P16388 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Kcna1P16388 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.31■■□□□ 1
Kcna1P16388 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.31■■□□□ 1
Kcna1P16388 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.31■■□□□ 1
Kcna1P16388 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.31■■□□□ 1
Kcna1P16388 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Kcna1P16388 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.31■■□□□ 1
Kcna1P16388 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.31■■□□□ 1
Kcna1P16388 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Kcna1P16388 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Kcna1P16388 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Kcna1P16388 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Kcna1P16388 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Kcna1P16388 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
Kcna1P16388 Gm6211-202ENSMUST00000167849 925 ntBASIC21.3■■□□□ 1
Kcna1P16388 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.3■■□□□ 1
Kcna1P16388 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.3■■□□□ 1
Kcna1P16388 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Kcna1P16388 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Kcna1P16388 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Kcna1P16388 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.3■■□□□ 1
Kcna1P16388 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Kcna1P16388 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kcna1P16388 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kcna1P16388 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kcna1P16388 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kcna1P16388 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kcna1P16388 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.29■■□□□ 1
Kcna1P16388 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.29■■□□□ 1
Kcna1P16388 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Kcna1P16388 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Kcna1P16388 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kcna1P16388 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Kcna1P16388 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kcna1P16388 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kcna1P16388 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kcna1P16388 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kcna1P16388 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.28■■□□□ 1
Kcna1P16388 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.28■■□□□ 1
Kcna1P16388 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.28■■□□□ 1
Kcna1P16388 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Kcna1P16388 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Kcna1P16388 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kcna1P16388 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kcna1P16388 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kcna1P16388 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kcna1P16388 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Kcna1P16388 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Kcna1P16388 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Kcna1P16388 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Kcna1P16388 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kcna1P16388 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Kcna1P16388 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.27■■□□□ 1
Kcna1P16388 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kcna1P16388 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.27■■□□□ 1
Kcna1P16388 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.27■■□□□ 1
Kcna1P16388 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.27■■□□□ 1
Kcna1P16388 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Kcna1P16388 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Kcna1P16388 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Kcna1P16388 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
Kcna1P16388 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Kcna1P16388 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Kcna1P16388 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Kcna1P16388 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Kcna1P16388 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.26■□□□□ 0.99
Kcna1P16388 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kcna1P16388 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Kcna1P16388 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Kcna1P16388 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kcna1P16388 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms