Protein–RNA interactions for Protein: P0C1T1

Hoxb2, Homeobox protein Hox-B2, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb2P0C1T1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Hoxb2P0C1T1 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.32■□□□□ 0.2
Hoxb2P0C1T1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxb2P0C1T1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxb2P0C1T1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxb2P0C1T1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxb2P0C1T1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxb2P0C1T1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxb2P0C1T1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxb2P0C1T1 Golph3-202ENSMUST00000226517 2359 ntBASIC16.31■□□□□ 0.2
Hoxb2P0C1T1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxb2P0C1T1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxb2P0C1T1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hoxb2P0C1T1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxb2P0C1T1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxb2P0C1T1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Hoxb2P0C1T1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hoxb2P0C1T1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxb2P0C1T1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxb2P0C1T1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxb2P0C1T1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxb2P0C1T1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxb2P0C1T1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hoxb2P0C1T1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Gm26524-201ENSMUST00000192339 390 ntBASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hoxb2P0C1T1 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxb2P0C1T1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxb2P0C1T1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxb2P0C1T1 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.28■□□□□ 0.2
Hoxb2P0C1T1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxb2P0C1T1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxb2P0C1T1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Hoxb2P0C1T1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hoxb2P0C1T1 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.28■□□□□ 0.2
Hoxb2P0C1T1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxb2P0C1T1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxb2P0C1T1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxb2P0C1T1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxb2P0C1T1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Hoxb2P0C1T1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxb2P0C1T1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxb2P0C1T1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.27■□□□□ 0.2
Hoxb2P0C1T1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxb2P0C1T1 Gm5408-201ENSMUST00000197998 747 ntBASIC16.27■□□□□ 0.2
Hoxb2P0C1T1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxb2P0C1T1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxb2P0C1T1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxb2P0C1T1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxb2P0C1T1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxb2P0C1T1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hoxb2P0C1T1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxb2P0C1T1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.26■□□□□ 0.19
Hoxb2P0C1T1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxb2P0C1T1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxb2P0C1T1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxb2P0C1T1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hoxb2P0C1T1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxb2P0C1T1 Gm12527-201ENSMUST00000117967 564 ntBASIC16.26■□□□□ 0.19
Hoxb2P0C1T1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.26■□□□□ 0.19
Hoxb2P0C1T1 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.26■□□□□ 0.19
Hoxb2P0C1T1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxb2P0C1T1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxb2P0C1T1 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.26■□□□□ 0.19
Hoxb2P0C1T1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxb2P0C1T1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms