Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.96■□□□□ 0.79
TnfP06804 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.96■□□□□ 0.79
TnfP06804 Gm20049-201ENSMUST00000219950 730 ntBASIC19.96■□□□□ 0.79
TnfP06804 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TnfP06804 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.95■□□□□ 0.78
TnfP06804 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.95■□□□□ 0.78
TnfP06804 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TnfP06804 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TnfP06804 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TnfP06804 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.95■□□□□ 0.78
TnfP06804 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.95■□□□□ 0.78
TnfP06804 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TnfP06804 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.95■□□□□ 0.78
TnfP06804 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TnfP06804 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TnfP06804 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
TnfP06804 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TnfP06804 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TnfP06804 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TnfP06804 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TnfP06804 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TnfP06804 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TnfP06804 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TnfP06804 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.94■□□□□ 0.78
TnfP06804 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TnfP06804 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.94■□□□□ 0.78
TnfP06804 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.94■□□□□ 0.78
TnfP06804 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TnfP06804 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TnfP06804 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TnfP06804 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TnfP06804 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TnfP06804 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.93■□□□□ 0.78
TnfP06804 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.93■□□□□ 0.78
TnfP06804 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.93■□□□□ 0.78
TnfP06804 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.93■□□□□ 0.78
TnfP06804 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TnfP06804 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TnfP06804 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TnfP06804 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TnfP06804 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TnfP06804 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TnfP06804 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TnfP06804 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.92■□□□□ 0.78
TnfP06804 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TnfP06804 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TnfP06804 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TnfP06804 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TnfP06804 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TnfP06804 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TnfP06804 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TnfP06804 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TnfP06804 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TnfP06804 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TnfP06804 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TnfP06804 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TnfP06804 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TnfP06804 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TnfP06804 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.91■□□□□ 0.78
TnfP06804 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TnfP06804 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TnfP06804 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.91■□□□□ 0.78
TnfP06804 Gm20760-201ENSMUST00000179197 648 ntBASIC19.91■□□□□ 0.78
TnfP06804 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TnfP06804 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TnfP06804 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TnfP06804 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TnfP06804 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TnfP06804 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TnfP06804 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TnfP06804 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TnfP06804 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TnfP06804 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TnfP06804 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TnfP06804 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TnfP06804 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TnfP06804 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TnfP06804 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TnfP06804 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TnfP06804 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.9■□□□□ 0.78
TnfP06804 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TnfP06804 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TnfP06804 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TnfP06804 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TnfP06804 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TnfP06804 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TnfP06804 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TnfP06804 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TnfP06804 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
TnfP06804 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TnfP06804 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TnfP06804 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TnfP06804 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
TnfP06804 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TnfP06804 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TnfP06804 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TnfP06804 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TnfP06804 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.89■□□□□ 0.77
TnfP06804 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TnfP06804 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms