Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P06328 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06328 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.71□□□□□ -0.21
P06328 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
P06328 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06328 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06328 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
P06328 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
P06328 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
P06328 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
P06328 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
P06328 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
P06328 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
P06328 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P06328 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P06328 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
P06328 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
P06328 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.7□□□□□ -0.22
P06328 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.7□□□□□ -0.22
P06328 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
P06328 Smad6-203ENSMUST00000179458 273 ntBASIC13.7□□□□□ -0.22
P06328 Gm21956-201ENSMUST00000179946 522 ntBASIC13.7□□□□□ -0.22
P06328 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.7□□□□□ -0.22
P06328 Gm13241-201ENSMUST00000094493 780 ntBASIC13.7□□□□□ -0.22
P06328 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P06328 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P06328 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.7□□□□□ -0.22
P06328 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P06328 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
P06328 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
P06328 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.7□□□□□ -0.22
P06328 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P06328 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P06328 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P06328 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
P06328 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
P06328 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.7□□□□□ -0.22
P06328 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
P06328 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
P06328 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.69□□□□□ -0.22
P06328 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
P06328 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P06328 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P06328 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.69□□□□□ -0.22
P06328 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
P06328 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P06328 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
P06328 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.69□□□□□ -0.22
P06328 Gm7860-201ENSMUST00000121190 879 ntBASIC13.69□□□□□ -0.22
P06328 Mir7075-201ENSMUST00000184187 82 ntBASIC13.69□□□□□ -0.22
P06328 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
P06328 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P06328 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
P06328 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
P06328 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
P06328 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
P06328 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.68□□□□□ -0.22
P06328 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.68□□□□□ -0.22
P06328 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
P06328 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
P06328 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
P06328 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
P06328 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06328 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06328 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P06328 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
P06328 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
P06328 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06328 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.67□□□□□ -0.22
P06328 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06328 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06328 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
P06328 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P06328 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06328 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
P06328 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P06328 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06328 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06328 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.67□□□□□ -0.22
P06328 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
P06328 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06328 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06328 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms