Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa3P02831 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa3P02831 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.66■□□□□ 0.1
Hoxa3P02831 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa3P02831 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.66■□□□□ 0.1
Hoxa3P02831 Gm13148-201ENSMUST00000118892 745 ntBASIC15.66■□□□□ 0.1
Hoxa3P02831 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Hoxa3P02831 Mir5133-201ENSMUST00000174955 77 ntBASIC15.66■□□□□ 0.1
Hoxa3P02831 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.66■□□□□ 0.1
Hoxa3P02831 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa3P02831 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa3P02831 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Hoxa3P02831 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hoxa3P02831 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
Hoxa3P02831 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxa3P02831 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
Hoxa3P02831 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Hoxa3P02831 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Hoxa3P02831 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.65■□□□□ 0.1
Hoxa3P02831 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa3P02831 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa3P02831 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa3P02831 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa3P02831 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa3P02831 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.65■□□□□ 0.1
Hoxa3P02831 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Hoxa3P02831 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.65■□□□□ 0.1
Hoxa3P02831 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Hoxa3P02831 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.65■□□□□ 0.1
Hoxa3P02831 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa3P02831 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa3P02831 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.65■□□□□ 0.1
Hoxa3P02831 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa3P02831 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Hoxa3P02831 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxa3P02831 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa3P02831 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.64■□□□□ 0.09
Hoxa3P02831 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa3P02831 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.64■□□□□ 0.09
Hoxa3P02831 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa3P02831 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.64■□□□□ 0.09
Hoxa3P02831 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa3P02831 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa3P02831 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa3P02831 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxa3P02831 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa3P02831 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa3P02831 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa3P02831 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa3P02831 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa3P02831 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa3P02831 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Hoxa3P02831 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa3P02831 Gm6365-201ENSMUST00000054711 744 ntBASIC15.63■□□□□ 0.09
Hoxa3P02831 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Hoxa3P02831 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa3P02831 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa3P02831 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa3P02831 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa3P02831 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxa3P02831 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.63■□□□□ 0.09
Hoxa3P02831 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxa3P02831 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Hoxa3P02831 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxa3P02831 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxa3P02831 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxa3P02831 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.62■□□□□ 0.09
Hoxa3P02831 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxa3P02831 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxa3P02831 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxa3P02831 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.62■□□□□ 0.09
Hoxa3P02831 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxa3P02831 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxa3P02831 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxa3P02831 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxa3P02831 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxa3P02831 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxa3P02831 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxa3P02831 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Hoxa3P02831 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxa3P02831 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxa3P02831 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Hoxa3P02831 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxa3P02831 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxa3P02831 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxa3P02831 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxa3P02831 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxa3P02831 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.61■□□□□ 0.09
Hoxa3P02831 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Hoxa3P02831 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxa3P02831 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Hoxa3P02831 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxa3P02831 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxa3P02831 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxa3P02831 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxa3P02831 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Hoxa3P02831 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hoxa3P02831 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Hoxa3P02831 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Hoxa3P02831 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms