Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TcraP01849 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TcraP01849 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TcraP01849 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TcraP01849 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.69□□□□□ -0.22
TcraP01849 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TcraP01849 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TcraP01849 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC13.69□□□□□ -0.22
TcraP01849 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TcraP01849 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TcraP01849 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
TcraP01849 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TcraP01849 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TcraP01849 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TcraP01849 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TcraP01849 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TcraP01849 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TcraP01849 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.69□□□□□ -0.22
TcraP01849 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TcraP01849 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TcraP01849 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TcraP01849 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TcraP01849 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TcraP01849 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TcraP01849 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TcraP01849 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TcraP01849 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TcraP01849 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TcraP01849 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TcraP01849 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TcraP01849 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TcraP01849 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TcraP01849 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TcraP01849 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TcraP01849 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TcraP01849 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TcraP01849 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TcraP01849 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.68□□□□□ -0.22
TcraP01849 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TcraP01849 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TcraP01849 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TcraP01849 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TcraP01849 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TcraP01849 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
TcraP01849 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TcraP01849 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TcraP01849 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.67□□□□□ -0.22
TcraP01849 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC13.67□□□□□ -0.22
TcraP01849 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC13.67□□□□□ -0.22
TcraP01849 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TcraP01849 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
TcraP01849 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TcraP01849 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TcraP01849 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TcraP01849 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TcraP01849 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.66□□□□□ -0.22
TcraP01849 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TcraP01849 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.66□□□□□ -0.22
TcraP01849 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TcraP01849 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.66□□□□□ -0.22
TcraP01849 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TcraP01849 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.66□□□□□ -0.22
TcraP01849 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.66□□□□□ -0.22
TcraP01849 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC13.66□□□□□ -0.22
TcraP01849 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TcraP01849 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TcraP01849 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TcraP01849 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TcraP01849 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TcraP01849 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
TcraP01849 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TcraP01849 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.65□□□□□ -0.22
TcraP01849 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TcraP01849 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TcraP01849 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TcraP01849 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TcraP01849 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TcraP01849 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TcraP01849 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TcraP01849 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TcraP01849 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TcraP01849 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TcraP01849 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TcraP01849 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TcraP01849 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TcraP01849 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC13.65□□□□□ -0.22
TcraP01849 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TcraP01849 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.65□□□□□ -0.22
TcraP01849 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TcraP01849 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TcraP01849 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TcraP01849 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.65□□□□□ -0.22
TcraP01849 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms