Protein–RNA interactions for Protein: O88967

Yme1l1, ATP-dependent zinc metalloprotease YME1L1, mousemouse

Known RBP Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Yme1l1O88967 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Yme1l1O88967 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Yme1l1O88967 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.68■□□□□ 0.74
Yme1l1O88967 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Yme1l1O88967 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Yme1l1O88967 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Yme1l1O88967 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Yme1l1O88967 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.68■□□□□ 0.74
Yme1l1O88967 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Yme1l1O88967 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Yme1l1O88967 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Yme1l1O88967 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Yme1l1O88967 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Yme1l1O88967 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Yme1l1O88967 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Yme1l1O88967 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Yme1l1O88967 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Yme1l1O88967 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Yme1l1O88967 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Yme1l1O88967 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Yme1l1O88967 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Yme1l1O88967 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Yme1l1O88967 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Yme1l1O88967 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Yme1l1O88967 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.66■□□□□ 0.74
Yme1l1O88967 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.66■□□□□ 0.74
Yme1l1O88967 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.66■□□□□ 0.74
Yme1l1O88967 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Yme1l1O88967 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Yme1l1O88967 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Yme1l1O88967 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.66■□□□□ 0.74
Yme1l1O88967 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Yme1l1O88967 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.65■□□□□ 0.74
Yme1l1O88967 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.65■□□□□ 0.74
Yme1l1O88967 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.65■□□□□ 0.74
Yme1l1O88967 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.65■□□□□ 0.74
Yme1l1O88967 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Yme1l1O88967 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Yme1l1O88967 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Yme1l1O88967 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Yme1l1O88967 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Yme1l1O88967 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Yme1l1O88967 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Yme1l1O88967 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Yme1l1O88967 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Yme1l1O88967 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Yme1l1O88967 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Yme1l1O88967 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Yme1l1O88967 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Yme1l1O88967 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.64■□□□□ 0.73
Yme1l1O88967 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Yme1l1O88967 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Yme1l1O88967 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Yme1l1O88967 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Yme1l1O88967 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.64■□□□□ 0.73
Yme1l1O88967 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Yme1l1O88967 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Yme1l1O88967 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Yme1l1O88967 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Yme1l1O88967 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Yme1l1O88967 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Yme1l1O88967 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Yme1l1O88967 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Yme1l1O88967 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Yme1l1O88967 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Yme1l1O88967 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Yme1l1O88967 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Yme1l1O88967 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Yme1l1O88967 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Yme1l1O88967 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Yme1l1O88967 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Yme1l1O88967 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Yme1l1O88967 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Yme1l1O88967 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Yme1l1O88967 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Yme1l1O88967 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Yme1l1O88967 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Yme1l1O88967 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.62■□□□□ 0.73
Yme1l1O88967 Gm9987-201ENSMUST00000069768 567 ntBASIC19.62■□□□□ 0.73
Yme1l1O88967 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Yme1l1O88967 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Yme1l1O88967 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Yme1l1O88967 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Yme1l1O88967 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.61■□□□□ 0.73
Yme1l1O88967 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.61■□□□□ 0.73
Yme1l1O88967 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Yme1l1O88967 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Yme1l1O88967 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Yme1l1O88967 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.61■□□□□ 0.73
Yme1l1O88967 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Yme1l1O88967 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.61■□□□□ 0.73
Yme1l1O88967 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Yme1l1O88967 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Yme1l1O88967 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Yme1l1O88967 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Yme1l1O88967 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Yme1l1O88967 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Yme1l1O88967 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Yme1l1O88967 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.6■□□□□ 0.73
Yme1l1O88967 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms