Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Gm13234-201ENSMUST00000120010 747 ntBASIC19.18■□□□□ 0.66
ShdO88834 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ShdO88834 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ShdO88834 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShdO88834 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ShdO88834 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShdO88834 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ShdO88834 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ShdO88834 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShdO88834 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
ShdO88834 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShdO88834 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShdO88834 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShdO88834 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ShdO88834 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ShdO88834 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ShdO88834 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ShdO88834 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ShdO88834 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ShdO88834 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ShdO88834 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ShdO88834 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ShdO88834 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.17■□□□□ 0.66
ShdO88834 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ShdO88834 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.17■□□□□ 0.66
ShdO88834 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ShdO88834 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ShdO88834 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.17■□□□□ 0.66
ShdO88834 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ShdO88834 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ShdO88834 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ShdO88834 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShdO88834 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShdO88834 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ShdO88834 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.16■□□□□ 0.66
ShdO88834 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.16■□□□□ 0.66
ShdO88834 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShdO88834 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ShdO88834 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShdO88834 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShdO88834 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShdO88834 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ShdO88834 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShdO88834 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ShdO88834 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ShdO88834 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ShdO88834 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ShdO88834 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ShdO88834 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ShdO88834 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ShdO88834 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ShdO88834 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ShdO88834 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ShdO88834 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ShdO88834 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ShdO88834 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ShdO88834 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
ShdO88834 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ShdO88834 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ShdO88834 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ShdO88834 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ShdO88834 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ShdO88834 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.14■□□□□ 0.65
ShdO88834 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.14■□□□□ 0.65
ShdO88834 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.14■□□□□ 0.65
ShdO88834 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ShdO88834 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ShdO88834 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
ShdO88834 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.14■□□□□ 0.65
ShdO88834 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ShdO88834 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ShdO88834 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ShdO88834 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShdO88834 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShdO88834 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShdO88834 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.13■□□□□ 0.65
ShdO88834 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.13■□□□□ 0.65
ShdO88834 Gm42778-201ENSMUST00000199644 553 ntBASIC19.13■□□□□ 0.65
ShdO88834 Gm42642-201ENSMUST00000200683 355 ntBASIC19.13■□□□□ 0.65
ShdO88834 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShdO88834 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShdO88834 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.13■□□□□ 0.65
ShdO88834 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShdO88834 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShdO88834 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ShdO88834 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShdO88834 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShdO88834 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShdO88834 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShdO88834 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ShdO88834 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ShdO88834 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ShdO88834 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ShdO88834 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ShdO88834 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
ShdO88834 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.12■□□□□ 0.65
ShdO88834 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ShdO88834 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
ShdO88834 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ShdO88834 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms