Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trdmt1O55055 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trdmt1O55055 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trdmt1O55055 Gm7977-201ENSMUST00000193787 748 ntBASIC20.77■□□□□ 0.92
Trdmt1O55055 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.77■□□□□ 0.92
Trdmt1O55055 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trdmt1O55055 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.77■□□□□ 0.92
Trdmt1O55055 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trdmt1O55055 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trdmt1O55055 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Trdmt1O55055 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.76■□□□□ 0.91
Trdmt1O55055 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trdmt1O55055 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trdmt1O55055 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trdmt1O55055 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trdmt1O55055 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trdmt1O55055 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trdmt1O55055 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trdmt1O55055 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trdmt1O55055 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trdmt1O55055 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Trdmt1O55055 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trdmt1O55055 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trdmt1O55055 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trdmt1O55055 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trdmt1O55055 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trdmt1O55055 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trdmt1O55055 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trdmt1O55055 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.75■□□□□ 0.91
Trdmt1O55055 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.75■□□□□ 0.91
Trdmt1O55055 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Trdmt1O55055 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.75■□□□□ 0.91
Trdmt1O55055 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trdmt1O55055 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trdmt1O55055 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trdmt1O55055 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trdmt1O55055 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.74■□□□□ 0.91
Trdmt1O55055 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trdmt1O55055 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trdmt1O55055 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trdmt1O55055 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trdmt1O55055 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trdmt1O55055 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trdmt1O55055 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trdmt1O55055 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trdmt1O55055 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trdmt1O55055 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trdmt1O55055 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trdmt1O55055 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trdmt1O55055 Mir1199-201ENSMUST00000117015 119 ntBASIC20.73■□□□□ 0.91
Trdmt1O55055 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trdmt1O55055 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trdmt1O55055 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trdmt1O55055 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trdmt1O55055 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trdmt1O55055 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trdmt1O55055 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trdmt1O55055 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
Trdmt1O55055 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trdmt1O55055 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trdmt1O55055 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.72■□□□□ 0.91
Trdmt1O55055 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Trdmt1O55055 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trdmt1O55055 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trdmt1O55055 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trdmt1O55055 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trdmt1O55055 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trdmt1O55055 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trdmt1O55055 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trdmt1O55055 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trdmt1O55055 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trdmt1O55055 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trdmt1O55055 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trdmt1O55055 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trdmt1O55055 Gm13836-201ENSMUST00000121159 501 ntBASIC20.71■□□□□ 0.91
Trdmt1O55055 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trdmt1O55055 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.71■□□□□ 0.91
Trdmt1O55055 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Trdmt1O55055 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trdmt1O55055 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trdmt1O55055 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trdmt1O55055 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trdmt1O55055 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trdmt1O55055 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Trdmt1O55055 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.7■□□□□ 0.9
Trdmt1O55055 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.7■□□□□ 0.9
Trdmt1O55055 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Trdmt1O55055 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trdmt1O55055 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trdmt1O55055 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trdmt1O55055 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.69■□□□□ 0.9
Trdmt1O55055 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.69■□□□□ 0.9
Trdmt1O55055 Gm11927-201ENSMUST00000118472 759 ntBASIC20.69■□□□□ 0.9
Trdmt1O55055 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.69■□□□□ 0.9
Trdmt1O55055 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.69■□□□□ 0.9
Trdmt1O55055 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trdmt1O55055 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Trdmt1O55055 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.69■□□□□ 0.9
Trdmt1O55055 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trdmt1O55055 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms