Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.52■□□□□ 0.72
Cldn5O54942 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn5O54942 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn5O54942 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn5O54942 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn5O54942 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn5O54942 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn5O54942 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn5O54942 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn5O54942 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Cldn5O54942 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn5O54942 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn5O54942 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn5O54942 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn5O54942 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn5O54942 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.51■□□□□ 0.71
Cldn5O54942 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn5O54942 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cldn5O54942 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.51■□□□□ 0.71
Cldn5O54942 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn5O54942 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.5■□□□□ 0.71
Cldn5O54942 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.5■□□□□ 0.71
Cldn5O54942 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn5O54942 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn5O54942 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn5O54942 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.5■□□□□ 0.71
Cldn5O54942 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn5O54942 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn5O54942 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cldn5O54942 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Cldn5O54942 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn5O54942 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn5O54942 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn5O54942 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.49■□□□□ 0.71
Cldn5O54942 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn5O54942 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.49■□□□□ 0.71
Cldn5O54942 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn5O54942 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cldn5O54942 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn5O54942 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn5O54942 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn5O54942 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.48■□□□□ 0.71
Cldn5O54942 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.48■□□□□ 0.71
Cldn5O54942 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn5O54942 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn5O54942 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.48■□□□□ 0.71
Cldn5O54942 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn5O54942 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn5O54942 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn5O54942 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn5O54942 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn5O54942 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn5O54942 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Cldn5O54942 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.47■□□□□ 0.71
Cldn5O54942 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn5O54942 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn5O54942 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn5O54942 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn5O54942 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn5O54942 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn5O54942 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cldn5O54942 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn5O54942 Notumos-201ENSMUST00000151998 2659 ntBASIC19.47■□□□□ 0.71
Cldn5O54942 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn5O54942 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cldn5O54942 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn5O54942 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn5O54942 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.46■□□□□ 0.71
Cldn5O54942 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.46■□□□□ 0.71
Cldn5O54942 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cldn5O54942 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Cldn5O54942 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.46■□□□□ 0.71
Cldn5O54942 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn5O54942 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn5O54942 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.45■□□□□ 0.7
Cldn5O54942 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Cldn5O54942 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn5O54942 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cldn5O54942 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn5O54942 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn5O54942 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.45■□□□□ 0.7
Cldn5O54942 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn5O54942 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn5O54942 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn5O54942 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn5O54942 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn5O54942 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Cldn5O54942 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn5O54942 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn5O54942 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn5O54942 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn5O54942 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn5O54942 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.44■□□□□ 0.7
Cldn5O54942 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.44■□□□□ 0.7
Cldn5O54942 Gm26524-201ENSMUST00000192339 390 ntBASIC19.44■□□□□ 0.7
Cldn5O54942 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn5O54942 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn5O54942 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.44■□□□□ 0.7
Cldn5O54942 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Cldn5O54942 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms