Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc1a6O35544 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.45■□□□□ 0.54
Slc1a6O35544 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slc1a6O35544 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc1a6O35544 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc1a6O35544 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc1a6O35544 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slc1a6O35544 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc1a6O35544 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.45■□□□□ 0.54
Slc1a6O35544 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Slc1a6O35544 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.45■□□□□ 0.54
Slc1a6O35544 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Slc1a6O35544 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slc1a6O35544 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc1a6O35544 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc1a6O35544 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Slc1a6O35544 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc1a6O35544 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.44■□□□□ 0.54
Slc1a6O35544 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.44■□□□□ 0.54
Slc1a6O35544 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slc1a6O35544 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc1a6O35544 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slc1a6O35544 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a6O35544 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a6O35544 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Slc1a6O35544 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.43■□□□□ 0.54
Slc1a6O35544 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a6O35544 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a6O35544 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Slc1a6O35544 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a6O35544 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a6O35544 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.43■□□□□ 0.54
Slc1a6O35544 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.43■□□□□ 0.54
Slc1a6O35544 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a6O35544 Gm12922-201ENSMUST00000120626 809 ntBASIC18.43■□□□□ 0.54
Slc1a6O35544 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a6O35544 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a6O35544 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Slc1a6O35544 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a6O35544 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.43■□□□□ 0.54
Slc1a6O35544 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.43■□□□□ 0.54
Slc1a6O35544 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a6O35544 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a6O35544 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Slc1a6O35544 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Slc1a6O35544 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a6O35544 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.42■□□□□ 0.54
Slc1a6O35544 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a6O35544 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a6O35544 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a6O35544 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a6O35544 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.42■□□□□ 0.54
Slc1a6O35544 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Slc1a6O35544 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a6O35544 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Slc1a6O35544 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a6O35544 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.42■□□□□ 0.54
Slc1a6O35544 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
Slc1a6O35544 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a6O35544 Gm45102-201ENSMUST00000207427 857 ntBASIC18.41■□□□□ 0.54
Slc1a6O35544 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a6O35544 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Slc1a6O35544 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a6O35544 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a6O35544 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Slc1a6O35544 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Slc1a6O35544 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Slc1a6O35544 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a6O35544 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.4■□□□□ 0.54
Slc1a6O35544 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Slc1a6O35544 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.4■□□□□ 0.54
Slc1a6O35544 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.4■□□□□ 0.54
Slc1a6O35544 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a6O35544 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Slc1a6O35544 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a6O35544 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slc1a6O35544 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.39■□□□□ 0.53
Slc1a6O35544 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.39■□□□□ 0.53
Slc1a6O35544 Spcs1-204ENSMUST00000226782 949 ntBASIC18.39■□□□□ 0.53
Slc1a6O35544 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc1a6O35544 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc1a6O35544 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc1a6O35544 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slc1a6O35544 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc1a6O35544 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Slc1a6O35544 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc1a6O35544 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc1a6O35544 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc1a6O35544 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Slc1a6O35544 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc1a6O35544 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc1a6O35544 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc1a6O35544 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc1a6O35544 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc1a6O35544 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc1a6O35544 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc1a6O35544 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.38■□□□□ 0.53
Slc1a6O35544 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Slc1a6O35544 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc1a6O35544 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms