Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Stx1aO35526 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Stx1aO35526 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Stx1aO35526 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Stx1aO35526 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Stx1aO35526 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stx1aO35526 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Stx1aO35526 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stx1aO35526 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Stx1aO35526 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stx1aO35526 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.05■□□□□ 0.96
Stx1aO35526 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.05■□□□□ 0.96
Stx1aO35526 Rps24-207ENSMUST00000224568 714 ntBASIC21.05■□□□□ 0.96
Stx1aO35526 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Stx1aO35526 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Stx1aO35526 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Stx1aO35526 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.05■□□□□ 0.96
Stx1aO35526 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.05■□□□□ 0.96
Stx1aO35526 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Stx1aO35526 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.04■□□□□ 0.96
Stx1aO35526 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Stx1aO35526 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Stx1aO35526 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.04■□□□□ 0.96
Stx1aO35526 Spcs1-204ENSMUST00000226782 949 ntBASIC21.04■□□□□ 0.96
Stx1aO35526 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.04■□□□□ 0.96
Stx1aO35526 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Stx1aO35526 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Stx1aO35526 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Stx1aO35526 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Stx1aO35526 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Stx1aO35526 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Stx1aO35526 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Stx1aO35526 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Stx1aO35526 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Stx1aO35526 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Stx1aO35526 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Stx1aO35526 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Stx1aO35526 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.03■□□□□ 0.96
Stx1aO35526 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Stx1aO35526 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Stx1aO35526 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Stx1aO35526 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Stx1aO35526 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Stx1aO35526 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Stx1aO35526 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Stx1aO35526 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Stx1aO35526 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.02■□□□□ 0.96
Stx1aO35526 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Stx1aO35526 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Stx1aO35526 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Stx1aO35526 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Stx1aO35526 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Stx1aO35526 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Stx1aO35526 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Stx1aO35526 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stx1aO35526 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stx1aO35526 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stx1aO35526 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.01■□□□□ 0.95
Stx1aO35526 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.01■□□□□ 0.95
Stx1aO35526 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stx1aO35526 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Stx1aO35526 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Stx1aO35526 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.01■□□□□ 0.95
Stx1aO35526 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stx1aO35526 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stx1aO35526 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Stx1aO35526 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stx1aO35526 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.01■□□□□ 0.95
Stx1aO35526 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stx1aO35526 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stx1aO35526 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.01■□□□□ 0.95
Stx1aO35526 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stx1aO35526 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.01■□□□□ 0.95
Stx1aO35526 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21■□□□□ 0.95
Stx1aO35526 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Stx1aO35526 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21■□□□□ 0.95
Stx1aO35526 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Stx1aO35526 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Stx1aO35526 Gm42900-201ENSMUST00000197184 2167 ntBASIC21■□□□□ 0.95
Stx1aO35526 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Stx1aO35526 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Stx1aO35526 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Stx1aO35526 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Stx1aO35526 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Stx1aO35526 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Stx1aO35526 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Stx1aO35526 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Stx1aO35526 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Stx1aO35526 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Stx1aO35526 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stx1aO35526 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stx1aO35526 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stx1aO35526 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Stx1aO35526 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stx1aO35526 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.98■□□□□ 0.95
Stx1aO35526 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.98■□□□□ 0.95
Stx1aO35526 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stx1aO35526 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stx1aO35526 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stx1aO35526 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms