Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn6O35454 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn6O35454 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn6O35454 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.71■□□□□ 0.75
Clcn6O35454 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn6O35454 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn6O35454 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn6O35454 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn6O35454 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.71■□□□□ 0.75
Clcn6O35454 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.71■□□□□ 0.75
Clcn6O35454 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Clcn6O35454 Gm10702-201ENSMUST00000098929 1268 ntBASIC19.71■□□□□ 0.75
Clcn6O35454 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn6O35454 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn6O35454 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.71■□□□□ 0.75
Clcn6O35454 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn6O35454 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn6O35454 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn6O35454 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.7■□□□□ 0.74
Clcn6O35454 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn6O35454 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Clcn6O35454 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn6O35454 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Clcn6O35454 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
Clcn6O35454 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn6O35454 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
Clcn6O35454 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn6O35454 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn6O35454 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn6O35454 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn6O35454 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Clcn6O35454 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Clcn6O35454 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn6O35454 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Clcn6O35454 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn6O35454 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn6O35454 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn6O35454 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn6O35454 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Clcn6O35454 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
Clcn6O35454 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.69■□□□□ 0.74
Clcn6O35454 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn6O35454 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Clcn6O35454 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn6O35454 Gm8312-201ENSMUST00000119380 618 ntBASIC19.69■□□□□ 0.74
Clcn6O35454 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn6O35454 Gm5244-202ENSMUST00000189517 743 ntBASIC19.69■□□□□ 0.74
Clcn6O35454 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn6O35454 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn6O35454 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.69■□□□□ 0.74
Clcn6O35454 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcn6O35454 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Clcn6O35454 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn6O35454 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn6O35454 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn6O35454 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.68■□□□□ 0.74
Clcn6O35454 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Clcn6O35454 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.68■□□□□ 0.74
Clcn6O35454 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn6O35454 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn6O35454 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn6O35454 AC160962.2-201ENSMUST00000224761 632 ntBASIC19.68■□□□□ 0.74
Clcn6O35454 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn6O35454 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn6O35454 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Clcn6O35454 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn6O35454 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn6O35454 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.68■□□□□ 0.74
Clcn6O35454 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn6O35454 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcn6O35454 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clcn6O35454 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.67■□□□□ 0.74
Clcn6O35454 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn6O35454 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn6O35454 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn6O35454 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn6O35454 Gm25318-201ENSMUST00000122554 314 ntBASIC19.67■□□□□ 0.74
Clcn6O35454 Gm45417-201ENSMUST00000209533 758 ntBASIC19.67■□□□□ 0.74
Clcn6O35454 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Clcn6O35454 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn6O35454 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn6O35454 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn6O35454 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn6O35454 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn6O35454 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.67■□□□□ 0.74
Clcn6O35454 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn6O35454 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcn6O35454 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn6O35454 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn6O35454 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn6O35454 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn6O35454 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.66■□□□□ 0.74
Clcn6O35454 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.66■□□□□ 0.74
Clcn6O35454 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.66■□□□□ 0.74
Clcn6O35454 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcn6O35454 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn6O35454 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn6O35454 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn6O35454 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn6O35454 Gm12439-201ENSMUST00000117162 365 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms