Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf11aO35305 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf11aO35305 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Tnfrsf11aO35305 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf11aO35305 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.27■□□□□ 0.84
Tnfrsf11aO35305 Gm42569-201ENSMUST00000200539 472 ntBASIC20.27■□□□□ 0.84
Tnfrsf11aO35305 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf11aO35305 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf11aO35305 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfrsf11aO35305 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tnfrsf11aO35305 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Tnfrsf11aO35305 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tnfrsf11aO35305 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11aO35305 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11aO35305 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11aO35305 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11aO35305 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Tnfrsf11aO35305 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11aO35305 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Tnfrsf11aO35305 Gm7514-201ENSMUST00000209475 934 ntBASIC20.26■□□□□ 0.83
Tnfrsf11aO35305 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.26■□□□□ 0.83
Tnfrsf11aO35305 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11aO35305 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Tnfrsf11aO35305 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf11aO35305 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf11aO35305 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Tnfrsf11aO35305 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf11aO35305 Gm6420-201ENSMUST00000193885 723 ntBASIC20.25■□□□□ 0.83
Tnfrsf11aO35305 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf11aO35305 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Tnfrsf11aO35305 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Tnfrsf11aO35305 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Tnfrsf11aO35305 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.25■□□□□ 0.83
Tnfrsf11aO35305 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Tnfrsf11aO35305 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11aO35305 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11aO35305 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11aO35305 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Tnfrsf11aO35305 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11aO35305 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11aO35305 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11aO35305 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11aO35305 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf11aO35305 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11aO35305 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
Tnfrsf11aO35305 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Tnfrsf11aO35305 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.23■□□□□ 0.83
Tnfrsf11aO35305 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11aO35305 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11aO35305 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11aO35305 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11aO35305 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11aO35305 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11aO35305 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11aO35305 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11aO35305 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11aO35305 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf11aO35305 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.22■□□□□ 0.83
Tnfrsf11aO35305 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.22■□□□□ 0.83
Tnfrsf11aO35305 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf11aO35305 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.22■□□□□ 0.83
Tnfrsf11aO35305 Nespas-201ENSMUST00000143738 1083 ntBASIC20.22■□□□□ 0.83
Tnfrsf11aO35305 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf11aO35305 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf11aO35305 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Tnfrsf11aO35305 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf11aO35305 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf11aO35305 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf11aO35305 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf11aO35305 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf11aO35305 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf11aO35305 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Tnfrsf11aO35305 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Tnfrsf11aO35305 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf11aO35305 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf11aO35305 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf11aO35305 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Tnfrsf11aO35305 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf11aO35305 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf11aO35305 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.21■□□□□ 0.83
Tnfrsf11aO35305 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf11aO35305 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf11aO35305 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf11aO35305 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf11aO35305 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf11aO35305 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Tnfrsf11aO35305 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Tnfrsf11aO35305 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf11aO35305 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf11aO35305 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf11aO35305 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf11aO35305 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf11aO35305 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf11aO35305 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Tnfrsf11aO35305 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.2■□□□□ 0.82
Tnfrsf11aO35305 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.2■□□□□ 0.82
Tnfrsf11aO35305 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf11aO35305 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf11aO35305 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf11aO35305 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms