Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col15a1O35206 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC24.27■■□□□ 1.48
Col15a1O35206 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC24.27■■□□□ 1.48
Col15a1O35206 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Col15a1O35206 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col15a1O35206 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col15a1O35206 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col15a1O35206 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Col15a1O35206 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col15a1O35206 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Col15a1O35206 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col15a1O35206 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col15a1O35206 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC24.26■■□□□ 1.47
Col15a1O35206 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC24.26■■□□□ 1.47
Col15a1O35206 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Col15a1O35206 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Col15a1O35206 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Col15a1O35206 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Col15a1O35206 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Col15a1O35206 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC24.25■■□□□ 1.47
Col15a1O35206 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC24.25■■□□□ 1.47
Col15a1O35206 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Col15a1O35206 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Col15a1O35206 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col15a1O35206 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col15a1O35206 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Col15a1O35206 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Col15a1O35206 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col15a1O35206 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col15a1O35206 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Col15a1O35206 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Col15a1O35206 AC175538.1-201ENSMUST00000225343 1269 ntBASIC24.24■■□□□ 1.47
Col15a1O35206 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col15a1O35206 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Col15a1O35206 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Col15a1O35206 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Col15a1O35206 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Col15a1O35206 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Col15a1O35206 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Col15a1O35206 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Col15a1O35206 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Col15a1O35206 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Col15a1O35206 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC24.23■■□□□ 1.47
Col15a1O35206 Gm20472-201ENSMUST00000174403 1240 ntBASIC24.23■■□□□ 1.47
Col15a1O35206 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Col15a1O35206 Flg-201ENSMUST00000050758 1488 ntBASIC24.22■■□□□ 1.47
Col15a1O35206 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Col15a1O35206 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
Col15a1O35206 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Col15a1O35206 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Col15a1O35206 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Col15a1O35206 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Col15a1O35206 Gm11643-201ENSMUST00000119578 864 ntBASIC24.21■■□□□ 1.47
Col15a1O35206 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Col15a1O35206 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Col15a1O35206 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Col15a1O35206 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Col15a1O35206 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC24.2■■□□□ 1.46
Col15a1O35206 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Col15a1O35206 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC24.2■■□□□ 1.46
Col15a1O35206 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Col15a1O35206 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Col15a1O35206 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC24.19■■□□□ 1.46
Col15a1O35206 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Col15a1O35206 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col15a1O35206 Mtag2-201ENSMUST00000058665 714 ntBASIC24.19■■□□□ 1.46
Col15a1O35206 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col15a1O35206 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col15a1O35206 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Col15a1O35206 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col15a1O35206 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Col15a1O35206 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col15a1O35206 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col15a1O35206 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Col15a1O35206 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Col15a1O35206 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC24.19■■□□□ 1.46
Col15a1O35206 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col15a1O35206 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col15a1O35206 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col15a1O35206 Gm9987-201ENSMUST00000069768 567 ntBASIC24.18■■□□□ 1.46
Col15a1O35206 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col15a1O35206 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col15a1O35206 Gm8309-201ENSMUST00000206627 1448 ntBASIC24.18■■□□□ 1.46
Col15a1O35206 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC24.17■■□□□ 1.46
Col15a1O35206 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col15a1O35206 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col15a1O35206 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col15a1O35206 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col15a1O35206 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col15a1O35206 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC24.17■■□□□ 1.46
Col15a1O35206 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col15a1O35206 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Col15a1O35206 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col15a1O35206 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC24.17■■□□□ 1.46
Col15a1O35206 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Col15a1O35206 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Col15a1O35206 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col15a1O35206 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col15a1O35206 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col15a1O35206 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms