Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Cx3cl1O35188 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
Cx3cl1O35188 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cx3cl1O35188 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cx3cl1O35188 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cx3cl1O35188 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cx3cl1O35188 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cx3cl1O35188 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cx3cl1O35188 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.53■□□□□ 0.4
Cx3cl1O35188 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cx3cl1O35188 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.53■□□□□ 0.4
Cx3cl1O35188 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cx3cl1O35188 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cx3cl1O35188 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cx3cl1O35188 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cx3cl1O35188 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cx3cl1O35188 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.53■□□□□ 0.4
Cx3cl1O35188 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cx3cl1O35188 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cx3cl1O35188 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cx3cl1O35188 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cx3cl1O35188 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cx3cl1O35188 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cx3cl1O35188 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cx3cl1O35188 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cx3cl1O35188 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cx3cl1O35188 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cx3cl1O35188 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.52■□□□□ 0.4
Cx3cl1O35188 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.52■□□□□ 0.4
Cx3cl1O35188 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Cx3cl1O35188 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cx3cl1O35188 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cx3cl1O35188 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cx3cl1O35188 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cx3cl1O35188 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cx3cl1O35188 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cx3cl1O35188 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cx3cl1O35188 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cx3cl1O35188 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cx3cl1O35188 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cx3cl1O35188 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cx3cl1O35188 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cx3cl1O35188 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cx3cl1O35188 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cx3cl1O35188 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cx3cl1O35188 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cx3cl1O35188 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cx3cl1O35188 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cx3cl1O35188 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cx3cl1O35188 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.51■□□□□ 0.39
Cx3cl1O35188 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Gm37179-201ENSMUST00000194862 823 ntBASIC17.5■□□□□ 0.39
Cx3cl1O35188 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cx3cl1O35188 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cx3cl1O35188 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cx3cl1O35188 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cx3cl1O35188 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cx3cl1O35188 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cx3cl1O35188 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cx3cl1O35188 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cx3cl1O35188 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.49■□□□□ 0.39
Cx3cl1O35188 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.49■□□□□ 0.39
Cx3cl1O35188 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cx3cl1O35188 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cx3cl1O35188 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cx3cl1O35188 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Cx3cl1O35188 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cx3cl1O35188 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cx3cl1O35188 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cx3cl1O35188 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cx3cl1O35188 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.48■□□□□ 0.39
Cx3cl1O35188 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cx3cl1O35188 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Cx3cl1O35188 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cx3cl1O35188 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.48■□□□□ 0.39
Cx3cl1O35188 Gm6420-201ENSMUST00000193885 723 ntBASIC17.48■□□□□ 0.39
Cx3cl1O35188 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cx3cl1O35188 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cx3cl1O35188 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Cx3cl1O35188 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cx3cl1O35188 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cx3cl1O35188 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Cx3cl1O35188 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms