Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf11bO08712 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf11bO08712 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf11bO08712 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf11bO08712 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Tnfrsf11bO08712 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf11bO08712 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf11bO08712 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf11bO08712 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf11bO08712 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.02■□□□□ 0.64
Tnfrsf11bO08712 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.02■□□□□ 0.64
Tnfrsf11bO08712 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf11bO08712 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf11bO08712 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Tnfrsf11bO08712 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf11bO08712 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf11bO08712 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf11bO08712 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf11bO08712 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Tnfrsf11bO08712 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Tnfrsf11bO08712 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tnfrsf11bO08712 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tnfrsf11bO08712 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf11bO08712 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11bO08712 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Tnfrsf11bO08712 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11bO08712 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11bO08712 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11bO08712 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11bO08712 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11bO08712 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19■□□□□ 0.63
Tnfrsf11bO08712 Gm14281-201ENSMUST00000121700 1294 ntBASIC19■□□□□ 0.63
Tnfrsf11bO08712 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19■□□□□ 0.63
Tnfrsf11bO08712 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19■□□□□ 0.63
Tnfrsf11bO08712 Gm27032-201ENSMUST00000183124 1116 ntBASIC19■□□□□ 0.63
Tnfrsf11bO08712 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19■□□□□ 0.63
Tnfrsf11bO08712 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11bO08712 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11bO08712 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11bO08712 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11bO08712 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf11bO08712 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf11bO08712 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.99■□□□□ 0.63
Tnfrsf11bO08712 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf11bO08712 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf11bO08712 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.99■□□□□ 0.63
Tnfrsf11bO08712 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf11bO08712 Gm38205-201ENSMUST00000192243 258 ntBASIC18.99■□□□□ 0.63
Tnfrsf11bO08712 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.99■□□□□ 0.63
Tnfrsf11bO08712 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf11bO08712 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf11bO08712 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf11bO08712 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf11bO08712 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Tnfrsf11bO08712 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf11bO08712 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.99■□□□□ 0.63
Tnfrsf11bO08712 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf11bO08712 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf11bO08712 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Tnfrsf11bO08712 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms