Protein–RNA interactions for Protein: J3QP37

Smim22, MCG1038270, isoform CRA_a, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim22J3QP37 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smim22J3QP37 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smim22J3QP37 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.71■□□□□ 0.59
Smim22J3QP37 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smim22J3QP37 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smim22J3QP37 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smim22J3QP37 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smim22J3QP37 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smim22J3QP37 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Smim22J3QP37 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.71■□□□□ 0.59
Smim22J3QP37 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smim22J3QP37 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.71■□□□□ 0.59
Smim22J3QP37 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Smim22J3QP37 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smim22J3QP37 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smim22J3QP37 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.71■□□□□ 0.59
Smim22J3QP37 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Smim22J3QP37 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.7■□□□□ 0.58
Smim22J3QP37 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smim22J3QP37 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim22J3QP37 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smim22J3QP37 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.7■□□□□ 0.58
Smim22J3QP37 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.7■□□□□ 0.58
Smim22J3QP37 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim22J3QP37 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smim22J3QP37 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smim22J3QP37 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smim22J3QP37 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.7■□□□□ 0.58
Smim22J3QP37 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim22J3QP37 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Smim22J3QP37 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim22J3QP37 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim22J3QP37 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smim22J3QP37 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.69■□□□□ 0.58
Smim22J3QP37 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smim22J3QP37 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smim22J3QP37 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.69■□□□□ 0.58
Smim22J3QP37 Gm44549-201ENSMUST00000208351 577 ntBASIC18.69■□□□□ 0.58
Smim22J3QP37 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim22J3QP37 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smim22J3QP37 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.69■□□□□ 0.58
Smim22J3QP37 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim22J3QP37 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim22J3QP37 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim22J3QP37 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim22J3QP37 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim22J3QP37 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim22J3QP37 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim22J3QP37 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Smim22J3QP37 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Smim22J3QP37 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.68■□□□□ 0.58
Smim22J3QP37 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smim22J3QP37 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.68■□□□□ 0.58
Smim22J3QP37 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smim22J3QP37 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.68■□□□□ 0.58
Smim22J3QP37 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim22J3QP37 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim22J3QP37 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim22J3QP37 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smim22J3QP37 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smim22J3QP37 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim22J3QP37 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smim22J3QP37 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim22J3QP37 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim22J3QP37 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smim22J3QP37 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.67■□□□□ 0.58
Smim22J3QP37 Odf3b-204ENSMUST00000227834 930 ntBASIC18.67■□□□□ 0.58
Smim22J3QP37 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim22J3QP37 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim22J3QP37 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
Smim22J3QP37 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim22J3QP37 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim22J3QP37 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.67■□□□□ 0.58
Smim22J3QP37 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim22J3QP37 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smim22J3QP37 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim22J3QP37 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Smim22J3QP37 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim22J3QP37 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
Smim22J3QP37 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim22J3QP37 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smim22J3QP37 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim22J3QP37 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smim22J3QP37 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim22J3QP37 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim22J3QP37 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smim22J3QP37 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim22J3QP37 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim22J3QP37 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim22J3QP37 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim22J3QP37 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim22J3QP37 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim22J3QP37 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smim22J3QP37 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.65■□□□□ 0.58
Smim22J3QP37 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smim22J3QP37 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.65■□□□□ 0.58
Smim22J3QP37 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.65■□□□□ 0.58
Smim22J3QP37 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.65■□□□□ 0.58
Smim22J3QP37 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim22J3QP37 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms