Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.51■□□□□ 0.23
Trav13d-3J3QMG8 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.51■□□□□ 0.23
Trav13d-3J3QMG8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav13d-3J3QMG8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav13d-3J3QMG8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13d-3J3QMG8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13d-3J3QMG8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13d-3J3QMG8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav13d-3J3QMG8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.5■□□□□ 0.23
Trav13d-3J3QMG8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13d-3J3QMG8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13d-3J3QMG8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13d-3J3QMG8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13d-3J3QMG8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13d-3J3QMG8 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.49■□□□□ 0.23
Trav13d-3J3QMG8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav13d-3J3QMG8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13d-3J3QMG8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13d-3J3QMG8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav13d-3J3QMG8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav13d-3J3QMG8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13d-3J3QMG8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13d-3J3QMG8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav13d-3J3QMG8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trav13d-3J3QMG8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Gm42778-201ENSMUST00000199644 553 ntBASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav13d-3J3QMG8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13d-3J3QMG8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13d-3J3QMG8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13d-3J3QMG8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13d-3J3QMG8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13d-3J3QMG8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13d-3J3QMG8 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.47■□□□□ 0.23
Trav13d-3J3QMG8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13d-3J3QMG8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav13d-3J3QMG8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav13d-3J3QMG8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13d-3J3QMG8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13d-3J3QMG8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13d-3J3QMG8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trav13d-3J3QMG8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trav13d-3J3QMG8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav13d-3J3QMG8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav13d-3J3QMG8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13d-3J3QMG8 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms