Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3139J3QK78 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3139J3QK78 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3139J3QK78 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3139J3QK78 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3139J3QK78 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Gm3139J3QK78 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Gm3139J3QK78 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Gm3139J3QK78 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3139J3QK78 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3139J3QK78 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Gm3139J3QK78 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3139J3QK78 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3139J3QK78 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3139J3QK78 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3139J3QK78 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3139J3QK78 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3139J3QK78 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Gm3139J3QK78 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3139J3QK78 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3139J3QK78 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3139J3QK78 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3139J3QK78 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3139J3QK78 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3139J3QK78 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gm3139J3QK78 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3139J3QK78 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.69■□□□□ 0.58
Gm3139J3QK78 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.69■□□□□ 0.58
Gm3139J3QK78 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3139J3QK78 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.69■□□□□ 0.58
Gm3139J3QK78 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.69■□□□□ 0.58
Gm3139J3QK78 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.69■□□□□ 0.58
Gm3139J3QK78 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Gm3139J3QK78 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3139J3QK78 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3139J3QK78 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3139J3QK78 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.68■□□□□ 0.58
Gm3139J3QK78 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.68■□□□□ 0.58
Gm3139J3QK78 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.68■□□□□ 0.58
Gm3139J3QK78 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3139J3QK78 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3139J3QK78 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Gm3139J3QK78 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3139J3QK78 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3139J3QK78 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3139J3QK78 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gm3139J3QK78 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Gm3139J3QK78 Gm5408-201ENSMUST00000197998 747 ntBASIC18.67■□□□□ 0.58
Gm3139J3QK78 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3139J3QK78 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3139J3QK78 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3139J3QK78 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3139J3QK78 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3139J3QK78 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Gm3139J3QK78 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3139J3QK78 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3139J3QK78 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Gm3139J3QK78 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3139J3QK78 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Gm3139J3QK78 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.67■□□□□ 0.58
Gm3139J3QK78 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Gm3139J3QK78 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3139J3QK78 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3139J3QK78 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.66■□□□□ 0.58
Gm3139J3QK78 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.66■□□□□ 0.58
Gm3139J3QK78 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3139J3QK78 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3139J3QK78 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3139J3QK78 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.66■□□□□ 0.58
Gm3139J3QK78 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3139J3QK78 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3139J3QK78 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3139J3QK78 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3139J3QK78 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3139J3QK78 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.65■□□□□ 0.58
Gm3139J3QK78 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3139J3QK78 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3139J3QK78 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3139J3QK78 Gm4968-201ENSMUST00000071458 858 ntBASIC18.65■□□□□ 0.58
Gm3139J3QK78 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3139J3QK78 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3139J3QK78 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Gm3139J3QK78 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Gm3139J3QK78 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.65■□□□□ 0.58
Gm3139J3QK78 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm3139J3QK78 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.64■□□□□ 0.58
Gm3139J3QK78 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gm3139J3QK78 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gm3139J3QK78 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gm3139J3QK78 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Gm3139J3QK78 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3139J3QK78 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3139J3QK78 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3139J3QK78 Gm12441-201ENSMUST00000121806 588 ntBASIC18.64■□□□□ 0.57
Gm3139J3QK78 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3139J3QK78 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.64■□□□□ 0.57
Gm3139J3QK78 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.64■□□□□ 0.57
Gm3139J3QK78 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Gm3139J3QK78 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Gm3139J3QK78 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms