Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn20G5E8X0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn20G5E8X0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn20G5E8X0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn20G5E8X0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn20G5E8X0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn20G5E8X0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cldn20G5E8X0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn20G5E8X0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn20G5E8X0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn20G5E8X0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn20G5E8X0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.28■□□□□ 0.2
Cldn20G5E8X0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn20G5E8X0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn20G5E8X0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.28■□□□□ 0.2
Cldn20G5E8X0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn20G5E8X0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn20G5E8X0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn20G5E8X0 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.28■□□□□ 0.2
Cldn20G5E8X0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn20G5E8X0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn20G5E8X0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
Cldn20G5E8X0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn20G5E8X0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn20G5E8X0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn20G5E8X0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn20G5E8X0 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.27■□□□□ 0.2
Cldn20G5E8X0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.27■□□□□ 0.2
Cldn20G5E8X0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn20G5E8X0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn20G5E8X0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn20G5E8X0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn20G5E8X0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn20G5E8X0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn20G5E8X0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn20G5E8X0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn20G5E8X0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cldn20G5E8X0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn20G5E8X0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn20G5E8X0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn20G5E8X0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn20G5E8X0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn20G5E8X0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn20G5E8X0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cldn20G5E8X0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn20G5E8X0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn20G5E8X0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn20G5E8X0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn20G5E8X0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn20G5E8X0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
Cldn20G5E8X0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn20G5E8X0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn20G5E8X0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.25■□□□□ 0.19
Cldn20G5E8X0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn20G5E8X0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn20G5E8X0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cldn20G5E8X0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn20G5E8X0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Mir6236-201ENSMUST00000184437 123 ntBASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn20G5E8X0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn20G5E8X0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn20G5E8X0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms