Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.67■■□□□ 1.22
Ube4aE9Q735 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ube4aE9Q735 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Ube4aE9Q735 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Ube4aE9Q735 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ube4aE9Q735 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC22.66■■□□□ 1.22
Ube4aE9Q735 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ube4aE9Q735 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ube4aE9Q735 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC22.66■■□□□ 1.22
Ube4aE9Q735 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Ube4aE9Q735 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ube4aE9Q735 Gm2399-201ENSMUST00000104944 225 ntBASIC22.66■■□□□ 1.22
Ube4aE9Q735 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC22.66■■□□□ 1.22
Ube4aE9Q735 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ube4aE9Q735 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ube4aE9Q735 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ube4aE9Q735 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Ube4aE9Q735 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ube4aE9Q735 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Ube4aE9Q735 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ube4aE9Q735 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ube4aE9Q735 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ube4aE9Q735 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ube4aE9Q735 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ube4aE9Q735 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ube4aE9Q735 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ube4aE9Q735 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Ube4aE9Q735 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ube4aE9Q735 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ube4aE9Q735 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ube4aE9Q735 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ube4aE9Q735 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ube4aE9Q735 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.22
Ube4aE9Q735 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ube4aE9Q735 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ube4aE9Q735 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ube4aE9Q735 Gm18666-201ENSMUST00000190039 958 ntBASIC22.64■■□□□ 1.21
Ube4aE9Q735 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC22.64■■□□□ 1.21
Ube4aE9Q735 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ube4aE9Q735 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Ube4aE9Q735 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ube4aE9Q735 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ube4aE9Q735 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ube4aE9Q735 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ube4aE9Q735 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ube4aE9Q735 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Ube4aE9Q735 Gm15847-201ENSMUST00000121417 1065 ntBASIC22.63■■□□□ 1.21
Ube4aE9Q735 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Ube4aE9Q735 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ube4aE9Q735 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ube4aE9Q735 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ube4aE9Q735 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ube4aE9Q735 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ube4aE9Q735 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC22.62■■□□□ 1.21
Ube4aE9Q735 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ube4aE9Q735 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ube4aE9Q735 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ube4aE9Q735 Golph3-202ENSMUST00000226517 2359 ntBASIC22.62■■□□□ 1.21
Ube4aE9Q735 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ube4aE9Q735 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ube4aE9Q735 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ube4aE9Q735 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Ube4aE9Q735 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Ube4aE9Q735 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ube4aE9Q735 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ube4aE9Q735 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC22.61■■□□□ 1.21
Ube4aE9Q735 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ube4aE9Q735 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Ube4aE9Q735 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Ube4aE9Q735 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ube4aE9Q735 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ube4aE9Q735 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ube4aE9Q735 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ube4aE9Q735 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ube4aE9Q735 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Ube4aE9Q735 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.6■■□□□ 1.21
Ube4aE9Q735 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ube4aE9Q735 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ube4aE9Q735 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Ube4aE9Q735 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ube4aE9Q735 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.6■■□□□ 1.21
Ube4aE9Q735 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC22.6■■□□□ 1.21
Ube4aE9Q735 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ube4aE9Q735 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
Ube4aE9Q735 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ube4aE9Q735 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ube4aE9Q735 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ube4aE9Q735 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ube4aE9Q735 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Ube4aE9Q735 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ube4aE9Q735 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ube4aE9Q735 Nrn1-203ENSMUST00000223611 1443 ntBASIC22.59■■□□□ 1.21
Ube4aE9Q735 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ube4aE9Q735 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC22.59■■□□□ 1.21
Ube4aE9Q735 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
Ube4aE9Q735 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC22.59■■□□□ 1.21
Ube4aE9Q735 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ube4aE9Q735 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ube4aE9Q735 Gm8309-201ENSMUST00000206627 1448 ntBASIC22.58■■□□□ 1.21
Ube4aE9Q735 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms