Protein–RNA interactions for Protein: D3Z5T1

Ccdc78, Coiled-coil domain-containing protein 78, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc78D3Z5T1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc78D3Z5T1 Gm27011-201ENSMUST00000182352 972 ntBASIC21.03■□□□□ 0.96
Ccdc78D3Z5T1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc78D3Z5T1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc78D3Z5T1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc78D3Z5T1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc78D3Z5T1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc78D3Z5T1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc78D3Z5T1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc78D3Z5T1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc78D3Z5T1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc78D3Z5T1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.02■□□□□ 0.96
Ccdc78D3Z5T1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.02■□□□□ 0.96
Ccdc78D3Z5T1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ccdc78D3Z5T1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.02■□□□□ 0.96
Ccdc78D3Z5T1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc78D3Z5T1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc78D3Z5T1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc78D3Z5T1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.02■□□□□ 0.95
Ccdc78D3Z5T1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc78D3Z5T1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc78D3Z5T1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ccdc78D3Z5T1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc78D3Z5T1 Gm4968-201ENSMUST00000071458 858 ntBASIC21■□□□□ 0.95
Ccdc78D3Z5T1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc78D3Z5T1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc78D3Z5T1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc78D3Z5T1 Gm12441-201ENSMUST00000121806 588 ntBASIC20.99■□□□□ 0.95
Ccdc78D3Z5T1 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.99■□□□□ 0.95
Ccdc78D3Z5T1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.99■□□□□ 0.95
Ccdc78D3Z5T1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc78D3Z5T1 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.99■□□□□ 0.95
Ccdc78D3Z5T1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc78D3Z5T1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc78D3Z5T1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc78D3Z5T1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc78D3Z5T1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc78D3Z5T1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc78D3Z5T1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccdc78D3Z5T1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc78D3Z5T1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc78D3Z5T1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc78D3Z5T1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc78D3Z5T1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc78D3Z5T1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc78D3Z5T1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc78D3Z5T1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc78D3Z5T1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc78D3Z5T1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ccdc78D3Z5T1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc78D3Z5T1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc78D3Z5T1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ccdc78D3Z5T1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc78D3Z5T1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc78D3Z5T1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc78D3Z5T1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc78D3Z5T1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc78D3Z5T1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc78D3Z5T1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc78D3Z5T1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc78D3Z5T1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc78D3Z5T1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc78D3Z5T1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc78D3Z5T1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc78D3Z5T1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc78D3Z5T1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc78D3Z5T1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc78D3Z5T1 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.96■□□□□ 0.95
Ccdc78D3Z5T1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc78D3Z5T1 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.96■□□□□ 0.95
Ccdc78D3Z5T1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.96■□□□□ 0.95
Ccdc78D3Z5T1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ccdc78D3Z5T1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.96■□□□□ 0.95
Ccdc78D3Z5T1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc78D3Z5T1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc78D3Z5T1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc78D3Z5T1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc78D3Z5T1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc78D3Z5T1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.95■□□□□ 0.94
Ccdc78D3Z5T1 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.95■□□□□ 0.94
Ccdc78D3Z5T1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.95■□□□□ 0.94
Ccdc78D3Z5T1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc78D3Z5T1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms