Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.79■□□□□ 0.12
Col6a4A2AX52 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a4A2AX52 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a4A2AX52 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.78■□□□□ 0.12
Col6a4A2AX52 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.78■□□□□ 0.12
Col6a4A2AX52 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.78■□□□□ 0.12
Col6a4A2AX52 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.78■□□□□ 0.12
Col6a4A2AX52 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
Col6a4A2AX52 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a4A2AX52 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Col6a4A2AX52 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a4A2AX52 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a4A2AX52 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.78■□□□□ 0.12
Col6a4A2AX52 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a4A2AX52 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Col6a4A2AX52 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Col6a4A2AX52 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.78■□□□□ 0.12
Col6a4A2AX52 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.78■□□□□ 0.12
Col6a4A2AX52 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Col6a4A2AX52 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a4A2AX52 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Col6a4A2AX52 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col6a4A2AX52 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col6a4A2AX52 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col6a4A2AX52 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col6a4A2AX52 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col6a4A2AX52 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col6a4A2AX52 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col6a4A2AX52 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col6a4A2AX52 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col6a4A2AX52 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col6a4A2AX52 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
Col6a4A2AX52 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Col6a4A2AX52 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col6a4A2AX52 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col6a4A2AX52 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.77■□□□□ 0.11
Col6a4A2AX52 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col6a4A2AX52 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col6a4A2AX52 Gm6659-201ENSMUST00000174752 547 ntBASIC15.77■□□□□ 0.11
Col6a4A2AX52 Gm7367-201ENSMUST00000057611 492 ntBASIC15.77■□□□□ 0.11
Col6a4A2AX52 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col6a4A2AX52 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.76■□□□□ 0.11
Col6a4A2AX52 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a4A2AX52 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a4A2AX52 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a4A2AX52 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.75■□□□□ 0.11
Col6a4A2AX52 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.75■□□□□ 0.11
Col6a4A2AX52 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.75■□□□□ 0.11
Col6a4A2AX52 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a4A2AX52 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a4A2AX52 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.75■□□□□ 0.11
Col6a4A2AX52 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a4A2AX52 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a4A2AX52 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a4A2AX52 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a4A2AX52 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a4A2AX52 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a4A2AX52 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Col6a4A2AX52 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a4A2AX52 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a4A2AX52 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms