Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC30.03■■■□□ 2.4
Shroom2A2ALU4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC30.03■■■□□ 2.4
Shroom2A2ALU4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Shroom2A2ALU4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
Shroom2A2ALU4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
Shroom2A2ALU4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Shroom2A2ALU4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
Shroom2A2ALU4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Shroom2A2ALU4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Shroom2A2ALU4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Shroom2A2ALU4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
Shroom2A2ALU4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Shroom2A2ALU4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Shroom2A2ALU4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.4
Shroom2A2ALU4 Gm25016-201ENSMUST00000158399 131 ntBASIC30.01■■■□□ 2.4
Shroom2A2ALU4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC30.01■■■□□ 2.4
Shroom2A2ALU4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC30.01■■■□□ 2.4
Shroom2A2ALU4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.4
Shroom2A2ALU4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC30.01■■■□□ 2.4
Shroom2A2ALU4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Shroom2A2ALU4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Shroom2A2ALU4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Shroom2A2ALU4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
Shroom2A2ALU4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC30.01■■■□□ 2.39
Shroom2A2ALU4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC30■■■□□ 2.39
Shroom2A2ALU4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC30■■■□□ 2.39
Shroom2A2ALU4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Shroom2A2ALU4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
Shroom2A2ALU4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Shroom2A2ALU4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
Shroom2A2ALU4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Shroom2A2ALU4 Gm42545-201ENSMUST00000202755 922 ntBASIC29.99■■■□□ 2.39
Shroom2A2ALU4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Shroom2A2ALU4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Shroom2A2ALU4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Shroom2A2ALU4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Shroom2A2ALU4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
Shroom2A2ALU4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Shroom2A2ALU4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Shroom2A2ALU4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC29.99■■■□□ 2.39
Shroom2A2ALU4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC29.99■■■□□ 2.39
Shroom2A2ALU4 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Shroom2A2ALU4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC29.99■■■□□ 2.39
Shroom2A2ALU4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC29.99■■■□□ 2.39
Shroom2A2ALU4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Shroom2A2ALU4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Shroom2A2ALU4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Shroom2A2ALU4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
Shroom2A2ALU4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC29.98■■■□□ 2.39
Shroom2A2ALU4 Gm27704-201ENSMUST00000185094 107 ntBASIC29.98■■■□□ 2.39
Shroom2A2ALU4 Gm37292-201ENSMUST00000192062 758 ntBASIC29.98■■■□□ 2.39
Shroom2A2ALU4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC29.98■■■□□ 2.39
Shroom2A2ALU4 Gm26766-202ENSMUST00000227544 2347 ntBASIC29.98■■■□□ 2.39
Shroom2A2ALU4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Shroom2A2ALU4 Gm15043-201ENSMUST00000118843 1543 ntBASIC29.97■■■□□ 2.39
Shroom2A2ALU4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Shroom2A2ALU4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
Shroom2A2ALU4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Shroom2A2ALU4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Shroom2A2ALU4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Shroom2A2ALU4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Shroom2A2ALU4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC29.96■■■□□ 2.39
Shroom2A2ALU4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC29.96■■■□□ 2.39
Shroom2A2ALU4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC29.95■■■□□ 2.39
Shroom2A2ALU4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Shroom2A2ALU4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Shroom2A2ALU4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC29.95■■■□□ 2.38
Shroom2A2ALU4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Shroom2A2ALU4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
Shroom2A2ALU4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
Shroom2A2ALU4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC29.94■■■□□ 2.38
Shroom2A2ALU4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Shroom2A2ALU4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Shroom2A2ALU4 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC29.93■■■□□ 2.38
Shroom2A2ALU4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
Shroom2A2ALU4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Shroom2A2ALU4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC29.93■■■□□ 2.38
Shroom2A2ALU4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Shroom2A2ALU4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Shroom2A2ALU4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
Shroom2A2ALU4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Shroom2A2ALU4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Shroom2A2ALU4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Shroom2A2ALU4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Shroom2A2ALU4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Shroom2A2ALU4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Shroom2A2ALU4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Shroom2A2ALU4 Mir5130-201ENSMUST00000175160 84 ntBASIC29.91■■■□□ 2.38
Shroom2A2ALU4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Shroom2A2ALU4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
Shroom2A2ALU4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC29.91■■■□□ 2.38
Shroom2A2ALU4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Shroom2A2ALU4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Shroom2A2ALU4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Shroom2A2ALU4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
Shroom2A2ALU4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC29.9■■■□□ 2.38
Shroom2A2ALU4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC29.9■■■□□ 2.38
Shroom2A2ALU4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Shroom2A2ALU4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Shroom2A2ALU4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms