Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm7860-201ENSMUST00000121190 879 ntBASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12-1A0N8R1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12-1A0N8R1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav12-1A0N8R1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12-1A0N8R1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12-1A0N8R1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12-1A0N8R1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav12-1A0N8R1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12-1A0N8R1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12-1A0N8R1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12-1A0N8R1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12-1A0N8R1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12-1A0N8R1 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.64■□□□□ 0.09
Trav12-1A0N8R1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12-1A0N8R1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav12-1A0N8R1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 Rarb-207ENSMUST00000225921 2756 ntBASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav12-1A0N8R1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Gm11421-201ENSMUST00000122124 294 ntBASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Smad6-203ENSMUST00000179458 273 ntBASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav12-1A0N8R1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12-1A0N8R1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12-1A0N8R1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12-1A0N8R1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Trav12-1A0N8R1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12-1A0N8R1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav12-1A0N8R1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12-1A0N8R1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12-1A0N8R1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav12-1A0N8R1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 Gm27801-201ENSMUST00000184174 223 ntBASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav12-1A0N8R1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12-1A0N8R1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav12-1A0N8R1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12-1A0N8R1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav12-1A0N8R1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms